| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0197 |
|---|
| Symbol | |
|---|
| ID | 8827138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 205064 |
|---|
| End bp | 210130 |
|---|
| Gene Length | 5067 bp |
|---|
| Protein Length | 1688 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | |
|---|
| Product | DEAD/H associated domain protein |
|---|
| Protein accession | YP_003482571 |
|---|
| Protein GI | 289595875 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000798352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGAG CTACTAAGAT GTACAGCATG GACGAGGTGA TATCGCTTTT TGACCCGATT
ATAGGGGAGT GGTTTACTTC CAAGTATTCC GAGCTTACAG AGCCTCAGGC TTATGCGATC
CCCCTAATTC ATTCAGGTAA GAATGTTCTT GTATCTTCAC CCACAGGGAG TGGTAAAACT
CTGACTGCTT TCATATCCAT TATCAATGAA TTATTTCTTT TAGCCAAAGA GGGAAAGCTT
GAGGATAAGG TCTACTGCGT TTATGTATCC CCCCTCAAAG CCCTTGCAAA TGATATACAT
AGGAACCTTG AAGTGCCCTT GGAAGAGATA AAAGATCTGG CTAAGAGCAA AGGGGTCAAA
ATTCCAAAGA TTCGTGTAGC AGTTCGCTCT GGTGATACGA GCACTGCAGA GAGACAAAAA
ATGCTTCGGA AGCCTCCTCA TATTTTCATA ACCACTCCTG AGTCCCTATC CCTCGTTCTC
ACAGCCCCAA AGTTTAGAGA GAGTTTCAGG GATGTTAGGT ATGTAATTGT CGATGAGATA
CACGAGCTTG CAAATAATAA GAGGGGAGTT ATGCTATCTT TGAATCTTGA AAGGTTGCAA
TATCTCGCCA AGAATTTTCA GCGAATAGGG CTAAGCGCAA CTCAAGCACC CATAGAAGAG
ATTGCAAAGT ATCTTGTTGG ATATGAAGGG GAGGAGCCAA GGAATGTGAG TATTGTTGAA
GTTGAGGTGA GGAAAAAACT TGATTTAAAG GTTATAACGC CTGTTGAGGA TTTAACCCTC
GTGCCTTACG AGGTTGCAAA TGAGAAGATG TACGATGTTT TGGTGGATAT AATAAACAGG
CATCGTACAA CGCTGATTTT CACAAATACT AGAAGTGGAA CTGAGCATGT GGCTTACAAG
CTTAAGGAGA AGGGTATTGA AAATTTAGAA GCGCATCATG GCTCTTTGAG CAAAGAAACG
AGGTTGAGAG TTGAGAAAGC ATTGAAGGAG GGGAAGTTGA AGGCTGTTAT ATCTTCAACA
TCTCTTGAAT TGGGCATTGA TATAGGGTAC ATTGATGTGG TTGTGCAAAT TGGCTCTCCA
AAGAGCATCG CCAAGGGATT GCAGAGAATA GGGCGCAGTG GACATGCTTA TGGTGCCACG
GCTAAAGGCA GATTCTTGGT TTTTGATAAT GATGAGCTAA TAGAATGCAC CACATTGGTT
AAATGCGCAT ACGATGGCAA GATTGATAGA GTTAGAATTC CTAAGAACTC TCTAGATGTT
CTCTCTCAAA TCATAGTGGG TATGAGCATA GAGAAGAGGT GGAATGTGGA TGAAGCCTAC
AATATAATTC GCTCCTCTTA CTGTTATCAC GAGTTGCCCA AGGAGAAATT CATACAAGTG
CTTCGCTACC TCGGGGGCTA TGTTTTAGGG GACACAGTTT ATTCAAAGAT ATGGTTTGAC
GAGGAGGACA TGGTATTTGG AAGGAAACGC AGTAGCAGAA TGATTTATTT TATGAACATG
GGTACAATTC CAGATGAGGC AGATTATCTT GTTATTGACC ACGAAGGGAA GAGATTGGGC
AGCTTAAGCG AGAAATTTGT AGAAAAATTG CAGAAAGGAG ATGTTTTTGT TTTAGGTGCG
AGAAGCTATG AAGTGCTGAG CATAAGAACT GGGAAAGTTG TAGTGAAAGA TGCCACAGGT
AAGAGACCCA CAGTTCCTTC TTGGGTTGGC GAGATGCTCC CCCGCTCATT TGATCTAAGT
GTTGAAGTTG GAAAATTTAG AGAGTTTGTA GAGAAAAATA TAAGGGAGAG AGGAGAGAAA
AAGACGATTG AGATTTTGAT GAAGGATTAT TATCTGGATT ACAGGGGTGC GAGAAGTATC
GTATCTTATA TAAAGCAGGG GATGCACCAC ATAGTACCCA CGCACAAGAG GGTTGTGATA
GAGGGGTATG TGGACCCTGC AGGGAAACAC AACATAATTT TCCATTATCC GTTTGGGAGG
AGGGTCAATG ATGCCCTTTC AAGAGCTTAC GCTTTCAAAA TAACCGAGAA GTATGGTGTA
AATGTTGGTA TAAGCATAAC CGATGATGCC TTTATGCTTA CCCTTAAGCG TAGAATTCGT
CTTGAAGATA TAAAGAATCT TTTAAGTTCG GATGAGATTG AAGATGCCTT GCGGAGGGCC
ATATTTAATA CAGAGCTTTT CAAGCAGAGA TTTAGACACT GTGCATCTCG CTCTTTCATG
GTTCTGCGAA GATACAAGGG AAGAGATATA TCCGTAGCAA GACAGCAGCT TAGGAGCGAT
AAGATATTGC GTCTTTTAAG CGAGATACCG GATTTTCCAG TTATGGAAGA GACATACAAT
GAGATATTCA ACATAGTTAT GGATTTGCCC CATGCAAAGG AAGTTCTAAG GAAGATTGAA
AATGGTGAAA TCGAAGTTAA AATAGTGCCA TATAGCGATA CACCCAGCAT CTTTGCTCAT
AGCATAATTC TATCGGGTAT TTCGGATATA GTTTTAATGG AAGACCGCAG TGCATTGCTC
AAGGAACTGC ATATGAAACT CTTGGAGAGA GTGATACCCA AGGAAGAACT AGCTGCCATG
TTTGATGAGG CACAAGTAAG TGCTTATTTT CAGAATAAGA TAAAGGTTAG GGGCAAAGAG
GATATTTTGC GCTTTCTTGA TTTAGCCCCC GGAACTGATG TACTTCGGAG AAGGGGTATA
AACATTTATG ATTACTCTGA GATACCAAAC GATAAACTCA AAAAGATGGT TGAAGAACTA
ATTTGGGATG ATAAGATTGT ATCCGTTTAC ACAACACGCC TTCTCTGGAC CACACCTCAA
AATTATCCAA TATTTGCGAC TCTTTACTCC AAGAATTCTG ATAACATAAT GGAGTTTGAA
GGTTTAAAAA CTGCCGAAGA GATTGCCAAG GAGAAAAAGA AAAAAGTGCA AGAGGTATTG
GAAATTTTGA AAAGTATGGA AAAAGCATAC CTTGTAGGAC GCAAAATAAA GGAAGGTAAG
ACATACTGGT ATAGGAGAGA AAGAATAACA ATTGAAAGGA ATTATGCTTT AGAGATTTTG
ATTAAAAAAC TCCTTTATTT CCGGGCTCCC CTAACCTTTG AGGAGATAGT TTATTCTCTG
CATATTTCAG AGGAGGATAT TAGGAAAGCT TTAAAATATT TGGTTGAAGA GGGAGAGGTT
GTTAAAGGCG TGTTTCTTGT GGGTTATGGA GAGCAGTACA TGCTTCGTTC CGATTACAAC
GAGATTTTGA AAGAATCAGG AATTGATGAA GAATCTTTGC AGGCCTATCG ATTTGGAAAG
ATAGTCAGAG AGATGGGCAT GGACGAGTAT TTTGAAAAAT TCTTGGTACT TTTTAATGAG
GATTCTATGC GTATAAGAAA TGCCTATGAG CAATTTACAG AGGCTTTGAG AAGGGAAGAG
GTACTTTATG GAAGATTTAT GAGAGGTAGG CTGTGCTATG CAAGCAGAGC AACTTTGCCT
CTACTAATAG CAGTGTATAG AAAAAGAGGG CTAAATGAAA ATGATCGCAA AGTCCTGTCT
CAGATAGGAT TGCTTGGAGA TAGAGCCACA TTTTCCACGC TTAAAGAAAT GAGCAACATG
TATCCTCATG AAATAAAGAA AATAATTGAG AAATTGGAGA ATAATCTGTA CATATATCGC
AAAGTTTTAC CAAACAAAAA GCCCGGAGAT TATCCTTTCA AAATAATGAA AATACAGCCA
AATGGAAGTA TGGAAGAGTT TTTTGAGAGA ATAGTGAAGG GCTATGGTCC GTTGACGAAG
AAAGATATTG AGAATATAAC GGCCCTGGAT CCAAAAGATT ATCTTGGGAA GTTCAAGAAG
ATAAGTGCAG GAGGAAAAAT ATTCTATTAT ACCGAGGGGA ATATTGAGGG AGATGGTAAG
GGAGAGTATA TCATCCCATC GGATGACCCT TATATATACA CAAGATTGAA TGAGCTCTAT
GACCATTTTG GAGAAGTTTT GAGTCATGTT TATGTGAAGG ATGGAAAACT CCTAAGCATT
ATGGAATTAA AGAGACACTC AGACCATATT TATGTAAATG AATTTATGGG AAATAAAAAT
GCTTATGAAA TTCTTGCAAA AGAGAGTATT GTAATAACTT CAAATGATCC TAAAAATGAG
AGCTATAGGA GAATAGGAGA TTACTATGTT TCGGGAGATG TAAGTTCCAT TCAATTTTCC
CCTAAAGATA TCTTTGCTTA TCTCCTCTGG AAGAGCAGGG TTATATCTGG AAGAAAGTTA
AAAACCACTC TTGATGTTGC GAGATTCTTA ATGGGTTTAC ACAATTCATT GGAAAATGTA
CGTGCTTACA AGCCCATAGA GATTGAAAAG TATTACCACT CTGAGCTTCT CTATGAGACA
TTGGATTTGC AGGGACATAT TATTTATGCG AGCAAGGAGA ATGTTGGTAT TTACCAATCT
TTGAAAAATA TGCATTTAGA TAAGGATATG GAAGTTGTAT TGAAAATCCT TGAAAAGTAT
GGTAAGATGG AAGTTCGCAG CATAATTGAA GAATCACCTT TGGGAAGTGA GAAAACTAGG
AGGGCTTTAA CATCTCTCTA CACAGGAAAT TACATAGCAA AGTATCCTTC AGGCTATATC
TATATAAAGC CTTTATACTC CAGGGATTAT GCCTCTCAAA AATATGTAGA GAACTTGGTT
AACATTTTAG GGTTCGTCAA TCCCGAGATT GTTTGTCATT TGAGTGGGGG ATATGTTTCA
AGTTATGAAT CTGCAGAAAT TCTAAACAGG ATGAATTTGA CCAAGGGTAT ATTTCTCAAC
GATGGAAATC TTTATAGAAT TCCAAATGAG GATATGGAGA ATATTGAAAA TATCGAAATT
TACGATGATG TTATTATTCT TGACCCAAAG GACCCAGTAT CTATGCTCTG GCAATACATA
AAACCCATGG ATTTTCAGGG ATATATGGTT ATAAAAGAGG GTGAAATTGT AGGAATAGTA
AAGGCAATTA TGCGCAAAAG AAGCGTCAAA ATACAAAAAT ACACCACAGA GGAAGCTAAA
AGATTGTTCA AAAATTATTT CTCTTAA
|
|---|
| Protein sequence | MERATKMYSM DEVISLFDPI IGEWFTSKYS ELTEPQAYAI PLIHSGKNVL VSSPTGSGKT
LTAFISIINE LFLLAKEGKL EDKVYCVYVS PLKALANDIH RNLEVPLEEI KDLAKSKGVK
IPKIRVAVRS GDTSTAERQK MLRKPPHIFI TTPESLSLVL TAPKFRESFR DVRYVIVDEI
HELANNKRGV MLSLNLERLQ YLAKNFQRIG LSATQAPIEE IAKYLVGYEG EEPRNVSIVE
VEVRKKLDLK VITPVEDLTL VPYEVANEKM YDVLVDIINR HRTTLIFTNT RSGTEHVAYK
LKEKGIENLE AHHGSLSKET RLRVEKALKE GKLKAVISST SLELGIDIGY IDVVVQIGSP
KSIAKGLQRI GRSGHAYGAT AKGRFLVFDN DELIECTTLV KCAYDGKIDR VRIPKNSLDV
LSQIIVGMSI EKRWNVDEAY NIIRSSYCYH ELPKEKFIQV LRYLGGYVLG DTVYSKIWFD
EEDMVFGRKR SSRMIYFMNM GTIPDEADYL VIDHEGKRLG SLSEKFVEKL QKGDVFVLGA
RSYEVLSIRT GKVVVKDATG KRPTVPSWVG EMLPRSFDLS VEVGKFREFV EKNIRERGEK
KTIEILMKDY YLDYRGARSI VSYIKQGMHH IVPTHKRVVI EGYVDPAGKH NIIFHYPFGR
RVNDALSRAY AFKITEKYGV NVGISITDDA FMLTLKRRIR LEDIKNLLSS DEIEDALRRA
IFNTELFKQR FRHCASRSFM VLRRYKGRDI SVARQQLRSD KILRLLSEIP DFPVMEETYN
EIFNIVMDLP HAKEVLRKIE NGEIEVKIVP YSDTPSIFAH SIILSGISDI VLMEDRSALL
KELHMKLLER VIPKEELAAM FDEAQVSAYF QNKIKVRGKE DILRFLDLAP GTDVLRRRGI
NIYDYSEIPN DKLKKMVEEL IWDDKIVSVY TTRLLWTTPQ NYPIFATLYS KNSDNIMEFE
GLKTAEEIAK EKKKKVQEVL EILKSMEKAY LVGRKIKEGK TYWYRRERIT IERNYALEIL
IKKLLYFRAP LTFEEIVYSL HISEEDIRKA LKYLVEEGEV VKGVFLVGYG EQYMLRSDYN
EILKESGIDE ESLQAYRFGK IVREMGMDEY FEKFLVLFNE DSMRIRNAYE QFTEALRREE
VLYGRFMRGR LCYASRATLP LLIAVYRKRG LNENDRKVLS QIGLLGDRAT FSTLKEMSNM
YPHEIKKIIE KLENNLYIYR KVLPNKKPGD YPFKIMKIQP NGSMEEFFER IVKGYGPLTK
KDIENITALD PKDYLGKFKK ISAGGKIFYY TEGNIEGDGK GEYIIPSDDP YIYTRLNELY
DHFGEVLSHV YVKDGKLLSI MELKRHSDHI YVNEFMGNKN AYEILAKESI VITSNDPKNE
SYRRIGDYYV SGDVSSIQFS PKDIFAYLLW KSRVISGRKL KTTLDVARFL MGLHNSLENV
RAYKPIEIEK YYHSELLYET LDLQGHIIYA SKENVGIYQS LKNMHLDKDM EVVLKILEKY
GKMEVRSIIE ESPLGSEKTR RALTSLYTGN YIAKYPSGYI YIKPLYSRDY ASQKYVENLV
NILGFVNPEI VCHLSGGYVS SYESAEILNR MNLTKGIFLN DGNLYRIPNE DMENIENIEI
YDDVIILDPK DPVSMLWQYI KPMDFQGYMV IKEGEIVGIV KAIMRKRSVK IQKYTTEEAK
RLFKNYFS
|
|---|
| |