Gene Aboo_0195 details

Gene Information

• Locus tag: Aboo_0195
• ID: 8827136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 202275
• End bp: 203018
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 43%
• Product: TPR repeat-containing protein
• Protein accession: YP_003482569
• Protein GI: 289595873

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.0471215
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCAAT GGGAAGAAGA TGTACAAAAA TATTTGCAGA TGGGCCTGTA TCAGCCGGCC 
TTAGAGCTCG TTGATGAAAT CCTGAAAAAA GGGGAGAATA GGAGGGCTAT GACCTACAAA 
GCATACATTC TCAGGTCTAT GGAGAAGGAT GATGAAGCTC TTAAAATAGT GGATACTTTG 
CTTAAAGAGC AGGAGGATGA GGATTTGCTT CTCTTGAAAG GTATGCTTCT TTTTGATAGC 
GAGAATTATA AAGAGGCAGC CAAATACTTC AGGAGGGTTA CAGAGATAAA TCCCGAGAAT 
ATAGATGCTT GGTATAATCT TGCATCTTGT TATGACGCTC AGGAGAAGTA TGATATTTCA 
GAGAAGTATT ATTCTAAACT GGTGGAAATC AATCCAGAAG ATGCAGAGGC GTGGAACAAT 
CTTGCTGTAG CGAGGTTGTT TCAGGAGAAA TATGAAAAAG CACTGGAGGC TGCCGAAAGG 
GCTATTGCCT TAGAGGATGA TTATGACAAC GCGTGGTACA ATAAGGGCTT AGCTTTGCAT 
TATTTGGAGA GGTACAAAGA GGCGATTAAG GCATTTAAGA AATGCATTGA AATTTCAGAT 
GACCCTGATG CTTGGTACGC TATGGGGATA TCATATGCCA ATATGGATAT GAAGGAGGAA 
GCAAAAAGGG CGCTGAGAGA GGCGCTTCGC AGGAGCCCAG ATGATGAGGA GATTAGAGAG 
GCGTTGGAAG GGCTGGAAGA ATGA 

 

Protein sequence

MEQWEEDVQK YLQMGLYQPA LELVDEILKK GENRRAMTYK AYILRSMEKD DEALKIVDTL 
LKEQEDEDLL LLKGMLLFDS ENYKEAAKYF RRVTEINPEN IDAWYNLASC YDAQEKYDIS 
EKYYSKLVEI NPEDAEAWNN LAVARLFQEK YEKALEAAER AIALEDDYDN AWYNKGLALH 
YLERYKEAIK AFKKCIEISD DPDAWYAMGI SYANMDMKEE AKRALREALR RSPDDEEIRE 
ALEGLEE