| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0188 |
|---|
| Symbol | |
|---|
| ID | 8827126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 195932 |
|---|
| End bp | 196885 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | Replication factor C |
|---|
| Protein accession | YP_003482562 |
|---|
| Protein GI | 289595866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00219478 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATG TTTGGGTTGA GAAATACAGG CCCAAGAGCT TAGATGAAGT TGTTGGGCAG
GATGAGATTG TTGATAGATT GAAATCCTAT GTTAAGGCAA AGACCATGCC GCATCTCCTT
TTTGCAGGTC CAGCTGGTAC GGGAAAAACC ACATGCGCAA TTGCCCTTGC AAGAGAATTG
TTTGGGGAGA ATTGGAGAGC GAGTTTTCAT GAGTTGAATG CAAGTGACGA GCGTGGTATA
GGAATAGTGC GTACAAAAAT CAAAGAGTAT GCAAGAACCG CAGCTCCAAA TGATGTTGGC
TTCAAAATAA TATTCTTGGA TGAGGCGGAT GCTCTCACTC CAGATGCACA GGCAGCTCTC
CGCCGCACCA TGGAGATGTA TTCTCGTACC TGCAGGTTCA TATTATCCTG TAATTATTCA
TCCAAAATAA TAGAGCCCAT ACAGTCAAGA TGTGCCGTGT TCCGTTTCAC TCCTCTTAAA
TCGGAGGACA TAAAGAAGAG ATTAAAGTAC ATAGCGGATA GCGAAGGAAA GAAAATAACG
GAAGATGCCC TCAATGCCAT AGTTTATATT TCCGGTGGAG ATATGAGAAA GGCCATAAAT
ATACTTCAAA TGTCTGCAGC AATATCAGAT ACCATCGATG AAGGAGTAGT TTACAAGGCT
ACAGGTCTAG CTAAGAGAGA GGATGTTGAA GATGTTCTTA AAAAAGCCCT TGCAGGGGAT
TTTATAGAGG CAAGGAATAA ATTGAATAAG CTGCTAGTGG AGCTTGGTCT CTCGGGAGAG
GATGTTATAA AACAGATTCA TCGTGTTATT TACGATTTAC CCATAGATGA TAGATTGAAA
GTTGAACTCT TGGATAAAAC TGGGGAGATA GAGTTCAGAA TAGTTGAAGG AGCTAACGAA
AGAATCCAAT TGGACGCGCT GCTTGCCTAT TTCACCCTTG CTGGCTCTAA ATGA
|
|---|
| Protein sequence | MEDVWVEKYR PKSLDEVVGQ DEIVDRLKSY VKAKTMPHLL FAGPAGTGKT TCAIALAREL
FGENWRASFH ELNASDERGI GIVRTKIKEY ARTAAPNDVG FKIIFLDEAD ALTPDAQAAL
RRTMEMYSRT CRFILSCNYS SKIIEPIQSR CAVFRFTPLK SEDIKKRLKY IADSEGKKIT
EDALNAIVYI SGGDMRKAIN ILQMSAAISD TIDEGVVYKA TGLAKREDVE DVLKKALAGD
FIEARNKLNK LLVELGLSGE DVIKQIHRVI YDLPIDDRLK VELLDKTGEI EFRIVEGANE
RIQLDALLAY FTLAGSK
|
|---|
| |