Gene Aboo_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0132 
Symbol 
ID8827068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp127831 
End bp130323 
Gene Length2493 bp 
Protein Length830 aa 
Translation table11 
GC content32% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003482506 
Protein GI289595810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00263601 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAG AACTCTTAAG TGTCATTCAA GATGCAAGGA GACGAGTACT TGAAGATATG 
AGTTTTGTTG AAAGGGTAAA AGCATTTTTC GCTCCAGAGA TCTTGGGAGA AGAAGTTGCT
CAAGAATTGA AAAACATGGG ACTTGAGGAG TTCGTTAGGG AACAGTACAG AAGTGTTGAG
AGAGAAGAGT ACGAAAGAAT AAGGGCAAAG GCAGAGTACG AGTTCTGGAG AGATTTTGAA
ATGGAGAAAA TCAAAAACGA TATTGCAAAG TATCTGAGCT CTGCGGTGCT TACAAACAAA
AGATTGCTTG GATTCTTTCC CATCTATGAT TTTGTTCCAT CAATTGATGA TATTTTTGAC
ATGCTAGTGG AAGAGCATGG AGATGATGTG GAGAGAGCTT TGAGAGAGAT GGAAAAAAAT
GTGAGTGGGG AAAATAAGAA GAAGGTTCAG GTTGCAAAGA AGAAAGTTCG CAGGAGGTCC
AAGGGCAGAA GAAGGAAAAT TATCTATGCT CTTTTGTCTG CTGGTTTAAT GATAGGAGCA
GCAGTCGGAA TGTATTATTA TGAAAAATAT GTGAAAGATT CTGATCATGA TGGAATACCT
GATTGGTTTG AAATACACAA ATATCATACA AATCCAAACA AAGCAGATAC TGATGGAGAT
GGTTTAACTG ATTATCAAGA AATATTTCAA TATCATACAA ATCCTTTAGT TAAAGATACA
GATCACGACG GAATAAATGA CGGATTAGAA GTACAATTAC ACATGAATCC TCTGAAACCA
ACATTGTTCA ATGAAACTGG TATACAAGAA GTTTTTTCCG ACCAAATGGT GAAGGACATA
AAAGCAATTG GAACAATATG GATACCTTCT TTTGGATTTA AATCTGCTTA TTGGGCAAAC
AGCACTGTAA CTGTTAGTTA TGGAAATGGA TACAAATATA CGCTTCCTAT AAAAGATTCA
TTGACTGGAG CAAGATTAAT TCCTACATTT ATATGGAATG CAGGTCGTTA CAAAAATTCA
TATTATGATC CAAGATTTTC TCCCTATTCA ACTTTATTAT ACCTAAATGA TATGACACAC
AATTTAGGAA ATAATATAAC GAAATTAAAT CATGATTCAA AAAAATTTTC TTCTGAATTA
CAAACTCTTG AAAATAGTTT GATAAACATA ACTAAGAATC CTAACGATAA TCAATCATTT
GAACGAGCAA ATAAAATATT GATGAAATAT AAACCACAGC AAAATGAAGA TATGTGGTAT
GATGAGTATT GGTTTTTTGA ACCAATCAAT AATAAATTCA GAAACTATTT GAGAGAATTT
AATAATAATT CTACAGATAG AATAAATGAT TTAGAAAAAG CTTTGTTCAT TTTGAATGGA
GATAAACAAA TAGCAAGTAC AATATCAAAC ACAACTCCGT ATGTCAGTCT GATGTTAGAT
TTTATGAATG AATATAAGAA AATAGTAAAA AAAATGCCTC ATTCTGAAGA AAATGTTAAG
ATTAATTGGT GGACTAATGA AGGAATGCAT TTATGGTCAA TTGAATCTGC AATGGGTATG
GTTACTATGA ACATACTAGA TTATCCGGAA ACATTAATAG AAGCATTGTT TATGATGAAT
GGTCAAATAT TTAATAATTC AAAACAAAAT GCCAAGATAT CTTCAGATTT AACACCTTTA
AATCTACCAG CTCCAGTTGA AAAATATTGG ACAAATTTCT ATGATAATTT ATCATCTTTA
GAAAAATCAA ATTTCAAAAA CTGGTTGAGA AGTTATACAA ATAACAGAAA TTCAACAGGA
ATTTTAGACT ATTTATTAAT AAGAGATTGG GTGTACAAAC TTTTACCAAC TAAAAATGTA
TACAGTACAA GCAATCCAAA AATAGTTGAT TACGGATTCA GGTTAACAAC AACAGGAATA
TTTGATATTG ATGACAAGGA AGACATAAAT TTCATAAGAG GACTGTGGAA GAAAGTGCCA
AACGAAGCTC CAAGTATAGA TAAAGTTTGG AACTATACAA ACGAAGCCGG TGTAGCATTG
CCTAGAGTGG GAAATATAGT ATTCGGTCCA TTCACAGTAG AAAAAGCTCA AAAGTTAGGT
AAAAATGATT GTGCTACTGC AACGGCAGCT ATGATTGAAA TTTTGATGAA ATATTATCCG
AAATATTTAC CAGTTGCTGT AATAAAAACA TTCCCAATTA TAACTGAAAA ATATAAGGCT
ATAGGTATTC ACAACATGCC ATTTTTCTAT CACGATGGAA ATTGGTATGA AATGGAGTTG
TGGAATGGAT ATAATAAACC AACCACAGAA ATAGAAGATC ATCTAGCTTC TAATATTGAT
GGATGGGTAA CAATACCGAT AGCTTTTGGA AATGCTCCTG TTTCTGTACC TTTGAGAGAT
GATAGATTGC TAAATATAGT GAAAGAGTAT GTGCCTGATA AAATTGTTAG TATGATGTAT
TATCTTAGGC AAAATAACAT TCATGATGAG TGA
 
Protein sequence
MSSELLSVIQ DARRRVLEDM SFVERVKAFF APEILGEEVA QELKNMGLEE FVREQYRSVE 
REEYERIRAK AEYEFWRDFE MEKIKNDIAK YLSSAVLTNK RLLGFFPIYD FVPSIDDIFD
MLVEEHGDDV ERALREMEKN VSGENKKKVQ VAKKKVRRRS KGRRRKIIYA LLSAGLMIGA
AVGMYYYEKY VKDSDHDGIP DWFEIHKYHT NPNKADTDGD GLTDYQEIFQ YHTNPLVKDT
DHDGINDGLE VQLHMNPLKP TLFNETGIQE VFSDQMVKDI KAIGTIWIPS FGFKSAYWAN
STVTVSYGNG YKYTLPIKDS LTGARLIPTF IWNAGRYKNS YYDPRFSPYS TLLYLNDMTH
NLGNNITKLN HDSKKFSSEL QTLENSLINI TKNPNDNQSF ERANKILMKY KPQQNEDMWY
DEYWFFEPIN NKFRNYLREF NNNSTDRIND LEKALFILNG DKQIASTISN TTPYVSLMLD
FMNEYKKIVK KMPHSEENVK INWWTNEGMH LWSIESAMGM VTMNILDYPE TLIEALFMMN
GQIFNNSKQN AKISSDLTPL NLPAPVEKYW TNFYDNLSSL EKSNFKNWLR SYTNNRNSTG
ILDYLLIRDW VYKLLPTKNV YSTSNPKIVD YGFRLTTTGI FDIDDKEDIN FIRGLWKKVP
NEAPSIDKVW NYTNEAGVAL PRVGNIVFGP FTVEKAQKLG KNDCATATAA MIEILMKYYP
KYLPVAVIKT FPIITEKYKA IGIHNMPFFY HDGNWYEMEL WNGYNKPTTE IEDHLASNID
GWVTIPIAFG NAPVSVPLRD DRLLNIVKEY VPDKIVSMMY YLRQNNIHDE