Gene Aboo_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0120 
Symbol 
ID8827056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp112401 
End bp117107 
Gene Length4707 bp 
Protein Length1568 aa 
Translation table11 
GC content38% 
IMG OID 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_003482494 
Protein GI289595798 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTAA AATGCGATGA GCTTGCGAAT GCTGTTAAAA TAGGCATTGT GATATTGGAT 
AAAAATTTCA AAATCGTAGA TGCAAATAGA GAAATTCTAA TTAAGGGCAA CATAAAAAAG
GAAAAACTAC TCAACACTCC ATTTCTCCTG TGGTTTCCAG AAAAAATGAG GGGCGAGATT
GAGAAAATTC TCCAAGATGT TTGGAATGAA AAGATTGAGT GGGGAAGGGG CTCATATGAG
CTATACCCTA TGGGTAGTGA TAAACCCCTT ATGGTAGATG TTCGCGTTAG AAAACTGAAA
GATTCTTTGG TTGTAACAAT AATCGACAAA AGCTGGCTCT ATAAGACATT AGAGAAATTG
AACATTGTAC AATCAGCTGT GGATAACATG GCTGAAGGGC TCGTTGTCAC GGATATAAAT
GGCACAATCC TATTCGTAAA TCCGGGATTC ACAAAGATGA CAGGGTATAG TGAGGAGGAA
GCGATAGGTA AAAATCCAAG AATCTTGAAG AGTGGTAAGC AAGACAGGAA ATTCTACGAA
AATCTGTGGA ACACAATCCT ATCGGGCAGA ATTTGGAAGG GCTCGCTAAT AAACAGGAGA
AAAGATGGAA CCCTGTACTG GGAAGAGATG ACGATAGTGC CTGTAAAGGA CAATAGGGGA
AAAATCACTA ATTTTGTAGC TGTAAAGAGA GATGTGTCTG AGAGGAAAAA ATTGGAAGAG
GAAGTGAGAA AAAAGGAAGA GTACTATCGC AAGATTTTCA ACATGAGCAA TGATGGGATA
TTCATAGAAA CTCTTGATGG CAAAATTGTG GATCTGAATG AGGCAGCAGC CAAGATGCTT
GGCTATAAGA GGGATGAGCT TCTAAAAGCT GGTATTGATG CCATAGTAAC AGAGGAGTAT
AAAGGAAAGA TAAAATCAAT AATCGAGAAA TTGAAAAAAG AGGGATATGC ACGCTTGGAA
GTGTTTGACA GGCACAAGGA TGGACACTTG GTCCCTATGG AACTGTCGAT AAGTACGCTC
CATATAGATG GTGAGCATCT AGCCCTCGTA ATTGCCAGAG ATTTATCCTT TAGGGAAGAG
CAAGAGACAA AGTACAGAAT CTTGAGCGAG ATGGCAAGCG ATGCTGTTAT TTTAATAAAA
GAGGATGGGA TAGTTGAGTA TTGGAACCCT GCTAGCCAAA AGATATTTGG ATACACGAGT
GATGAGGCTT TGAACAAGCC ATTTTGGGAG CTTATTGTGC CTAAAAAATA TCTGCCAGGC
ACCAATTTTC AAAATTTAGT AAAGAAAGGT TTTGAGAAGG CCTCTTTACC CTACACAAGG
AGATTTGAGG TTCAAGCCAA AAGAAAAGAT GGAAAATTAA TAGATGTTGA GCTTGGCATA
TCCATATTTA ACATAAGTGG AAAGAAGTAT GCATTAGCGG TTATAAGGGA CATAAGTGAA
AGGGTTGAGA TGGAAAGAAA ATTGAAAAAA CAAACCGACG AGCTTAAAGC AATCTATCGC
TTCTCCCTCG AGCTTGGCTC GATTATAGAC CTACCCACTC TGTCCCAAAA AGTCTATGAA
GAGATAAAGA AGCTCATAAA TTTCGATAGC TTTTCCTTGG GCATTGTTGA CTGGAACAAA
AACACCGTAA GATTCGATAT TCTAACTTCC GGGGAGAAAA ATTTGGGACC GAAAGAGATT
GAGATAGACC CTGAAAACTC GTTAAGCAGC TGGGTTATAA CATCTAAAAG TGCTTTATTG
ATTAAGAACT TCGAGAAAGA AAAGGACAAA CTGCCTGCAA AATGGATTAA GGTTGGAAAA
ATGCCAAAAT CCTGGCTCGG CGTGCCTTTA ATGTATAAGG GTAAAGTTCT CGGCATTATA
GTGCTTCAAA GTTTCAAGCC ATACCAGTAC GATGAGAACG ATAGAGATTT CATAATGACG
CTTGCAGCAC AACTTTCTAT AATAATAGCA AATGCACAAC TCTACAACGA GCTAAAAATA
AACGAAGAGA GATATAGAGG AATTGTAGAT TCAAGCATCG TAGGCATAAG CGTTGCCGAT
ATAAGTGGAA TTTTGACCTT TGTAAACGAT AAATTTGCAG ATATGCTAGG ATACAAAAAG
GAGGAGCTCA TAGGAAAGAG CATATTGGAG ATGACCACAG AAGATGGAAG AAAAGTCTTC
AAAAAGATGC TAGATAGGAG AAAAGAAGGA CTAATAGATT ACTACGAGAA TGTTCTTGTT
AGAAAAGATG GTAAAATTAT ATATGCCTTG ATAAACGCAT CTCCACTCAG AGATGCAAAT
GGGAATATAA TAGGCTCAAC TGCTGTGATA GTAGATATAA CGGAGAGAAA GAAAGAGATG
GAAGAGCTAA AAAGGAAAAA TGCTGTGCTA AGCGCTCTTT ACAACATATC ACTAAAAATG
GGAGAAGCTC CTAATCTTGA AGAAATTTTC AAGATTACCT ATAAGGAGCT TTATGATATT
TTTAATTTTG ACTGGTTCTT CATAGCCCTA TGCGAGAATA ATATGCTCAA CTATGTGATT
CTAAAATCGA GGAATAAAAG CATTGTCAAC TACAAATTAG AGTGCAATTC TGAACACTCT
CTCGCTGCCA GAGCCGTGAA AGAGGGAAAG CCCCTCCTAT TCAGAGATTT GCCAAAGGAA
GTAAAAGAGG AAAATTACAC ATTAATTGAG GGCACGGAAG AAGTGCCTAC GAGATCCGTC
ATCATATTTC CACTTCTTTA CAAAAATGAG AGATTGGGTG TCATAAGTAT CCAGAGCAAA
AGACCAAATG TCTATAATGA AAATGATGTA AAATATGTTT CCACGATAGC ACATGCTATT
TCAATATTCA TAAAAAATAT TCAGCTTTAC AGGCAGATAA AGAGCACAAA GGAAAAATTG
GAAAAAATAG TGAATTCTTC GCTTGTGGGA ATTGATACAA CCGATTTAGA TGGAAATGTA
ACCTTTGTAA ACGATGCACT TGCAGAGATG CTTGGATACA GGAAAGAAGA GCTCATAGGA
AAGAACATAT TGGAAGTTAC GACTCCTAAG GGAAAAGAAA TATTAAAGCA TATGCTAGAA
AGGAGAAGAA AGGGATTCAA AGATTACTAT GAAAACGAAC TAATACGCAA GGATGGAAAA
ATTATACACG CTTTAATAAA TGCAGCACCC CTCAGAGACG AAAATGGAAA AATCGTTGGA
ACTTTAGGCA TAGTTTTGGA CATAACAAAG AGAAAAGAGA TGGAAGAAAA AATAAAGAAT
GAGAGGGAGA GGTACAAGCA TTTATTCGAA AGTATGGCGA ATATAATTGT GCTCATACAG
AATGAAAGGG TAATCTATAT AAACAAGCAA TTTGAGGCTG CCACGGGATA TCAAAAAGAT
GAGGTTCTAA ACAAGCCCTT CATTGATTTT GTGCATCCAG ATATGAGGGA TATCGTGCTC
AGCAATTATA AAAGGAGAAT GCGAGGGCTT GAAGCTCCTG ACCATTACAT AATAAAGCTC
ATAGGAAAGA AGGGAAAAGA AATCTGGATG GATATCCGCA CATCCGTTAT AACCTGGGAG
CATGGAAAAG CAGACCTCGT GAGTATGATG GATATTACCG AAATAAAGGA GATGGAAGAC
AAGCTAATCA CCTTGGATGA AATTGCAAGA AAATTGAAAA TGGCTAAGAG CAAAGATGAA
ATTTATGAAA TTGCCATACA AAATCTGTAC AGGGTGCTCA ATCTTTACAA TTCTGCAATT
TTAGAGATAA AAGATCACAC CTTGGTTATA GTTAAGTCCC GCGGCTATGT AAATCCAAAC
ATAAAATTGG ATGTAGAAAG TGAGAGAGGC ATAACAGCAT GGGTTGCCAG AAACAATTTA
CCATATTACT CTCCAAATAC AGATGAGGAC CCACTCTACA TAACGGGAGT AAGAGGTGCA
AAATGCGAGT ATGCTACACC CATATCCATA GATGATGAAG TGTATGGGGT TCTGGATGTG
CAGAAAGATG AGCCCTATTC AATAAGCGAG GACGATATGA AACTAATCGA TTTGCTTGCA
AACAACATGG CTGTTGCCCT AAGAAGCTTA GAAATTCAAA AAGATTTAGA GAAAGCGAAG
AACTTGCAAG AGCTCATGCT CCACATTGTA AGCCATGATT TGAAAAATCC TCTTGCAGTT
ATTGAGGGCT ACATAGACCT GATGAAAGAA GGTTTTGACC CGTCTTACTT GGATGCTATG
CAAATGGCAG TAGAGGAGGC ATCAAGTATA ATTGAAAAGG CAAGATTGTT CTCGAAACTC
GGAGCTGGAA AGATTGACGA AGAGAGAAAA TTGATAGATT TAAAGGAAGA ACTTGAAAAT
GTTTCCTCTC TGCTATCCCA CAAGTACCCA TCTGGAAAAA TAAATATCTC TGTGGATAAA
ATTGAGATCT ATGCATTTCC AATAATAAAG GAAGTTTTCA CAAACATAAT TGACAACGCA
TTTAAGTATG GGGCTAAGAA TGTGGACATA TCTCTGATTG ATAAGGATGA GAATGTTGAA
ATAAGAATTG CTGATGACGG CCCAGGCATA CCTAAAGAAC TGCGCAATAC CATATTTAAC
ACCTTTGAAA CACTCTCAAA GAAGAAGGGA AGCGGATTAG GACTGAGCAT TGTCAAGATG
ATTGTAGAGA TGCACGATGG CAAGGTTTGG GTAGAGGAGA ACAAACCCAA GGGAAGTGTT
TTTGTAATAC AATTACCTAA GGATTGA
 
Protein sequence
MQVKCDELAN AVKIGIVILD KNFKIVDANR EILIKGNIKK EKLLNTPFLL WFPEKMRGEI 
EKILQDVWNE KIEWGRGSYE LYPMGSDKPL MVDVRVRKLK DSLVVTIIDK SWLYKTLEKL
NIVQSAVDNM AEGLVVTDIN GTILFVNPGF TKMTGYSEEE AIGKNPRILK SGKQDRKFYE
NLWNTILSGR IWKGSLINRR KDGTLYWEEM TIVPVKDNRG KITNFVAVKR DVSERKKLEE
EVRKKEEYYR KIFNMSNDGI FIETLDGKIV DLNEAAAKML GYKRDELLKA GIDAIVTEEY
KGKIKSIIEK LKKEGYARLE VFDRHKDGHL VPMELSISTL HIDGEHLALV IARDLSFREE
QETKYRILSE MASDAVILIK EDGIVEYWNP ASQKIFGYTS DEALNKPFWE LIVPKKYLPG
TNFQNLVKKG FEKASLPYTR RFEVQAKRKD GKLIDVELGI SIFNISGKKY ALAVIRDISE
RVEMERKLKK QTDELKAIYR FSLELGSIID LPTLSQKVYE EIKKLINFDS FSLGIVDWNK
NTVRFDILTS GEKNLGPKEI EIDPENSLSS WVITSKSALL IKNFEKEKDK LPAKWIKVGK
MPKSWLGVPL MYKGKVLGII VLQSFKPYQY DENDRDFIMT LAAQLSIIIA NAQLYNELKI
NEERYRGIVD SSIVGISVAD ISGILTFVND KFADMLGYKK EELIGKSILE MTTEDGRKVF
KKMLDRRKEG LIDYYENVLV RKDGKIIYAL INASPLRDAN GNIIGSTAVI VDITERKKEM
EELKRKNAVL SALYNISLKM GEAPNLEEIF KITYKELYDI FNFDWFFIAL CENNMLNYVI
LKSRNKSIVN YKLECNSEHS LAARAVKEGK PLLFRDLPKE VKEENYTLIE GTEEVPTRSV
IIFPLLYKNE RLGVISIQSK RPNVYNENDV KYVSTIAHAI SIFIKNIQLY RQIKSTKEKL
EKIVNSSLVG IDTTDLDGNV TFVNDALAEM LGYRKEELIG KNILEVTTPK GKEILKHMLE
RRRKGFKDYY ENELIRKDGK IIHALINAAP LRDENGKIVG TLGIVLDITK RKEMEEKIKN
ERERYKHLFE SMANIIVLIQ NERVIYINKQ FEAATGYQKD EVLNKPFIDF VHPDMRDIVL
SNYKRRMRGL EAPDHYIIKL IGKKGKEIWM DIRTSVITWE HGKADLVSMM DITEIKEMED
KLITLDEIAR KLKMAKSKDE IYEIAIQNLY RVLNLYNSAI LEIKDHTLVI VKSRGYVNPN
IKLDVESERG ITAWVARNNL PYYSPNTDED PLYITGVRGA KCEYATPISI DDEVYGVLDV
QKDEPYSISE DDMKLIDLLA NNMAVALRSL EIQKDLEKAK NLQELMLHIV SHDLKNPLAV
IEGYIDLMKE GFDPSYLDAM QMAVEEASSI IEKARLFSKL GAGKIDEERK LIDLKEELEN
VSSLLSHKYP SGKINISVDK IEIYAFPIIK EVFTNIIDNA FKYGAKNVDI SLIDKDENVE
IRIADDGPGI PKELRNTIFN TFETLSKKKG SGLGLSIVKM IVEMHDGKVW VEENKPKGSV
FVIQLPKD