Gene Aboo_0109 details

Gene Information

• Locus tag: Aboo_0109
• ID: 8827045
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 104239
• End bp: 105027
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 38%
• Product: Pre-mRNA processing ribonucleoprotein, binding domain protein
• Protein accession: YP_003482483
• Protein GI: 289595787

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.380556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTAAAT GGTATGGAGC ATTCAAAATT GAAGAAAATA CGAAGGAAAA ATATATATTT 
CCCGATGAGC AAAGGGCTGA TATTATTGTG AAGATAAGAG AAGGGGATTA CAGTGTTCTT 
CCCTTCGATG ATGAAAACAT AGTTTTTGAA GGAGAGCTCA AAGATAGGAG TACATTAATA 
TCCACAGCAA TAGAGGTTGC CAAGAGGGAG ATGAAAGAAA AGCTCGGAGA TGATTACATA 
CTCATTGAAA ATTTAAACAC CTATGATGAC CTTATCTCAA CGATAAACTT GCTGAATGAA 
AGGTTATTGG AATGGGATAG AATTGCAGAA ATCAAGGGAA AGGATATGAG GAGCGGAGAG 
ATGTTAAAAA AAGAAATTGA AACCCTGGAA AAATTGAAGG AGGATATAGC AGATGAGATT 
GATGATTTGA GCAATGTTTT ATGTCCAAAT CTAGCATTCC TTGTAGGGCC AATAATAGCA 
GCAAGACTTA TAGCAAGTGC TGGTGGGTTG AGAAGATTGG CAAATTTACC TGCAAGCACA 
ATACAAGTAC TGGGTGCTGA AGAGGCTTTC TTCCGCCATT TGAAATCAGG AGCAAAATGC 
CCAAAGCATG GCATAATCTT TAGAGTACCG TGGGTTAGAA ACTCTCCTAA AAAATTGAGG 
GGTAAGATTG CTAGAGCCCT TGCGGCAAAG ATTGCTATCG CTGCAAAAAT TGATTATTAC 
AAAGGAGATT TTATAGGGGA TAAATTAAAA GAGGAAATGG AAAAAAGAGT GGAGGAGATA 
AGAAAATGA 

 

Protein sequence

MIKWYGAFKI EENTKEKYIF PDEQRADIIV KIREGDYSVL PFDDENIVFE GELKDRSTLI 
STAIEVAKRE MKEKLGDDYI LIENLNTYDD LISTINLLNE RLLEWDRIAE IKGKDMRSGE 
MLKKEIETLE KLKEDIADEI DDLSNVLCPN LAFLVGPIIA ARLIASAGGL RRLANLPAST 
IQVLGAEEAF FRHLKSGAKC PKHGIIFRVP WVRNSPKKLR GKIARALAAK IAIAAKIDYY 
KGDFIGDKLK EEMEKRVEEI RK