| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0082 |
|---|
| Symbol | |
|---|
| ID | 8827018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | - |
|---|
| Start bp | 80479 |
|---|
| End bp | 81291 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding domain protein |
|---|
| Protein accession | YP_003482456 |
|---|
| Protein GI | 289595760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.063095 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCT ACATACCTTC AGTGGCACCA ATTTTAGAGG TGAGGGACGA AACTCCAGAT
ACAAAAACCT TCAGGATAGG GGCAGAGCTA CCATTCAAGC CCGGGCAATT TGTGGAACTA
AGTGTATTTG GTTATGGGGA GGCGCCTATT TCCATATCTG GAGGAGATGA TGAGGCCATA
GAGCTTACCA TAAGGGCCGT TGGTAACGTT ACCAAGAAAA TACACAGGAT GAAGGAGGGG
GACTATGTAG GCATACGGGG GCCCTTTGGA AATGGCTGGC CCATAGAAAA GGCTGTGGAT
AAGAATATAT TGATCATCGC AGGAGGCATC GGTCTCGCCC CCCTCAAACC TGTTGTGGAA
TATGTGTGTA AACATAGGGA ACGTTTCAAG GATGCCACTC TTCTATATGG TGCCAGAAGG
CCATCCCTTA TGCTTTTCAA ATACAAATTT GAAGAATGGA GGAAATATAT GGATATTCTC
TTAACGGTGG ATGAGGCAGA ACCTGGATGG GAAGGGCATG TGGGTGTTGT AACAACCCTT
TGTGATAAGA TAAGGCATGT GGCAGATACC ATTACTTATA TGTGTGGCCC GCCCATAATG
ATGAAATACA CCTCCATGGT TCTCATAGAA CTAGGTTTTC CTCCCAGTGA GATGTACCTT
TCCCTGGAGA GAAATATGAA ATGCGGCATC GGCATATGCG GTCACTGTGG AGTTGGAGGA
GTATATGTAT GCCGTGATGG GCCAGTTTTC TCTCTAAATA AGGCTCTGAG ATTTATTGAA
AAGCCTCATG AGGTTCAGGG GGTGTTAGAT TGA
|
|---|
| Protein sequence | MNPYIPSVAP ILEVRDETPD TKTFRIGAEL PFKPGQFVEL SVFGYGEAPI SISGGDDEAI
ELTIRAVGNV TKKIHRMKEG DYVGIRGPFG NGWPIEKAVD KNILIIAGGI GLAPLKPVVE
YVCKHRERFK DATLLYGARR PSLMLFKYKF EEWRKYMDIL LTVDEAEPGW EGHVGVVTTL
CDKIRHVADT ITYMCGPPIM MKYTSMVLIE LGFPPSEMYL SLERNMKCGI GICGHCGVGG
VYVCRDGPVF SLNKALRFIE KPHEVQGVLD
|
|---|
| |