Gene Aboo_0081 details

Gene Information

• Locus tag: Aboo_0081
• ID: 8827017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: -
• Start bp: 79736
• End bp: 80482
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 37%
• Product: NADH ubiquinone oxidoreductase 20 kDa subunit
• Protein accession: YP_003482455
• Protein GI: 289595759

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.242431
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATATTG GCATCATCTC ATTGTCTTGC TGCGAGGGCT GCTCTGTACA GTTTTTGAAT 
ATGGAAAAGG AAATTCTGGA AATTCTCAAG TATATGGGAA TAAATAATTT TAGATTGGCT 
AAGGAAATAA ATGAATGGCC TGTGGAAATT GCTTTTGTAG AAGGTACACC TACAAACAGG 
GATGAAATAA TAAAATTGCT GAAAATAAGA AAAGACTCAA AGATTTTAGT TGCTCTCGGA 
ACATGTGCTG CTACGGGAGG AGTACCGGCA ATAGTTAATA CTCTGGAGAA GAAGGAAGCT 
ATGAAAATTT ATAACGGTGT TCCACCGAAG ATACCTATAG ATGCTAAACC CTTGAAATAT 
TATGTAGATG TTGATTACAT TCTTTATGGA TGCCCATTTT CAAAGGAGGA ATTGAAAGAA 
TTGATAACTT CAGTTCTGCT GGGTAAGGGA TTTAGAAATA AGAGATACAG TGTATGTGTG 
GAGTGTACCC TTAGAGAGAA TGGGTGTCTT CTGGAAGAAG GATATTTATG TATGGGGCCA 
GTGACCAGAG CCGGATGTAA AGCGATATGT CCTTCTAATA ATACTCAATG TTTGGGGTGT 
AGAGGGCCAT ATGAAGATGC TAATTTCAAA GGTCATATAA GAATTCTTCT AGAAATGGGA 
TTTTCAAAGG ATGAGATAGC TGAGGCATAT TCTATATTTT CCTATGAAGA GTTGAAGGAG 
GTAATAGCAT GGTTGAAAGA AGAATAA 

 

Protein sequence

MNIGIISLSC CEGCSVQFLN MEKEILEILK YMGINNFRLA KEINEWPVEI AFVEGTPTNR 
DEIIKLLKIR KDSKILVALG TCAATGGVPA IVNTLEKKEA MKIYNGVPPK IPIDAKPLKY 
YVDVDYILYG CPFSKEELKE LITSVLLGKG FRNKRYSVCV ECTLRENGCL LEEGYLCMGP 
VTRAGCKAIC PSNNTQCLGC RGPYEDANFK GHIRILLEMG FSKDEIAEAY SIFSYEELKE 
VIAWLKEE