Gene Aboo_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0064 
Symbol 
ID8827000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp63642 
End bp65549 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content37% 
IMG OID 
ProductTrimethylamine-N-oxide reductase (cytochrome c) 
Protein accessionYP_003482438 
Protein GI289595742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTCA ATGTATGCAT GCGTGATTGC TACGATACTT GCTCATTGAT AAGTGAGATG 
AAAGATGGAA AAATGCGAGT TAGAGCAAAC CCAAAAAATA AAGTAACCAG CAATTTTCTG
TGTCCAAAAG GGGCCTTACT TCCAAAATGG TTATACAGCA AGGAAAGAGT AAAAACCCCT
CTAAATCGCA AGGGAAAAAA GCCCTCTTTA TCATTCAATC CTACCTCTTG GGATAATGCC
ATGAGTATTA TAGCAAAAAA GATAAAGGAT ACAATTAAAG GATACGGAGA GAGCTCCGTA
CTTCTATACT ACTATTATGG AGATAGAGGT TTTGTGAATG CGAATTTTCC ACATAGATTG
TTCAATTATA TCAACGCAAG CATAATCGAG GATACCATCT GTGATCGCTC AGGAGAAGAA
GCTCTCAAAG ATATCTATGG CACATCTCAG GGCATGGATC CAGAGGAACT GGAAAATGAA
AATTTAATTG TATATTGGGG CATCAACGCG GCATGGACAA ACATACACGG ATTTTATCTG
ACAAAGAGAT TGGGTCTGGA CATATGGAAT GTTGATGTAG TAAAAACAAA GACTGCAAAG
ATGTCAAATA AGTTCTTTAT GATAAAACCA GAAACGGATG TACTTTTTGC TCTGGGAATT
GCAAAAATAA TCGTAGATAG GAACTTGTAT GATGAAAAAT TTGTTGAAAC ATATACGAGA
GGATTTGAAG ATTTCAAAGA GTATCTGAAA TCAATAGATT TAAATTTCGT GGCGGAAGAG
AGCGGGATAG ACATAGAGAA AATCGAAGAT TTTGCCATAA ACTATGCTAG GGAGAGAGGA
ATTGTACATA TCGGGTATGG CTTTCAAAGA ACAATAAACG GTGGGGAGGC AGTTAGAGCC
ATATCTATTT TACCTGCATT GATCGGAAAG AAGAGGGGGT TCATTTACAG TAATCGTATA
CTTCCGCGGA ATTATGTACG GGGAATTTCT CTAAGAAAGA AGGGAGGGTA TAGAATAACA
CATATGGAAT TAGCAGATTA CATAGAAGAT GAAAAGATTA AGTTCGTATT CATTTACGGA
ACAAATCCAT TTGCCACCTT ACCAAATCAG AGGAAATTGA GAGATGCAGT ATTGAGTAGC
GATGTGTTCA TTGTCTTGCA CGATATTTTT CTAACAGACA CCGCTTTATT TTCCGATATT
TTTCTCCCAT CAAACACATT CTTCGAGAGA GTAGATATTG CTGATTCTTA TTACCATCGA
TACATTTCAT TCAATGACAA ACTCACGAAA ATAAGTGGAA AGAGCAATAG CGATGTTGCA
AGGATGTTAG CTAAAGCAAT GAATTTGAAA GAGAAAACGC TATATGAGAA GGACGAAGAA
ATTATAAGAA AAACTCTAAA TGTTCTTGGC ATATCTTATA AAAGGCTTAA AGAAAGAGGA
GTGTTGAAAA TTCCAATAGA CTCTTATGAG CCAAAGACGG AGAGCGGTAA AATTGAAATA
AGCTCCTCCC GCGCCAAAAA TAGGGGTCTA AACGCTTTTC CAACATATAT GCCGATAAAA
GGAAGAGGGT TAAAACTCAT AAGTGCCACA TATCTTTTTA CTATATCCTC TCAATATTAC
AATACCTATG GATATGTGGA TACAAACATA TATTTAAATC CCGAAGATGC ACTGGATAGG
GGAATAAAAG ACGGCGCTAA AGTCAGAGTT TTCAATGAAT ACGGTGAGAT AATAACAAAT
GCAAAGATTA GCCATGATAT TCAGAGAGGT ATAGCCCTCA TGTACAAAGC ATTCTGGCCA
ATGAAAATCG GATGGAATGC AAATTTCTTA ACCCCAAACA AAATGAATGA AAAATATGGA
AAAGGAACTA CTTTACACTC TGTATGGGTA GAGGTGGAAA GGATTTAA
 
Protein sequence
MKFNVCMRDC YDTCSLISEM KDGKMRVRAN PKNKVTSNFL CPKGALLPKW LYSKERVKTP 
LNRKGKKPSL SFNPTSWDNA MSIIAKKIKD TIKGYGESSV LLYYYYGDRG FVNANFPHRL
FNYINASIIE DTICDRSGEE ALKDIYGTSQ GMDPEELENE NLIVYWGINA AWTNIHGFYL
TKRLGLDIWN VDVVKTKTAK MSNKFFMIKP ETDVLFALGI AKIIVDRNLY DEKFVETYTR
GFEDFKEYLK SIDLNFVAEE SGIDIEKIED FAINYARERG IVHIGYGFQR TINGGEAVRA
ISILPALIGK KRGFIYSNRI LPRNYVRGIS LRKKGGYRIT HMELADYIED EKIKFVFIYG
TNPFATLPNQ RKLRDAVLSS DVFIVLHDIF LTDTALFSDI FLPSNTFFER VDIADSYYHR
YISFNDKLTK ISGKSNSDVA RMLAKAMNLK EKTLYEKDEE IIRKTLNVLG ISYKRLKERG
VLKIPIDSYE PKTESGKIEI SSSRAKNRGL NAFPTYMPIK GRGLKLISAT YLFTISSQYY
NTYGYVDTNI YLNPEDALDR GIKDGAKVRV FNEYGEIITN AKISHDIQRG IALMYKAFWP
MKIGWNANFL TPNKMNEKYG KGTTLHSVWV EVERI