| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0059 |
|---|
| Symbol | |
|---|
| ID | 8826995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 59322 |
|---|
| End bp | 60158 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
|---|
| Protein accession | YP_003482433 |
|---|
| Protein GI | 289595737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCAA TGGAAGAGAT GAGAAAAGAG CAAGAAAAAC TTTTGCGCAC TGACAGGTTG
CCACATGTTT GGTGTCCTGG CTGCGGGATA GGTATAGTTT TAAACGCATT TTTGAGGGCT
TTCATTAGAT CAAAAATGGA CCCAAATAAA CTTGTAGTGG TATCGGGCAT AGGATGCACT
GGTAGAGCAG CAGGCTATGT AAATGTAGAT TCATTCCATA CCACACATGG AAGGGGTATA
CCATTCGCAG TGGGTATAAA ATTTGCAAGA CCGGATTTGA ATGTAGTTGT ATTCAGCGGA
GATGGAGACC TATTTGCCAT AGGCGGCAAT CATTTTGTGA ATGCTGCTCG TAGAAACCAT
GATTTGCTCA TAATCGCAGT TAATAACTTC ACATATGGAA TGACTGGCGG ACAGCATGGA
CCCACTACAC CTACAGGCGC ATATACAACT ACCACGCCTT ATGGAAACCC TGATAGACCA
TTCAACATAC CCCATCTAGC CATATCCCTA GGGGCACCCT ATGTAGCAAG ATGGACTACC
TATCATGTGA ATCAGATACA GAATAGTATA TACCATGCAT TGCACAAAAA AGGATTTAGA
GTTATAGAGA TCATATCCCA ATGCCCAACT GTGTATGGAA GAAGAAACGA TATGAAAACA
CCCTTGGAGA TGATGCACTA TTTCCAGAAA AACTCTGTAA GAAAAGATGA CGCCTCCTTT
GAAGAACTAG AATTGAGCTA TAATGGAAAA ATCGTAGTAG GCGTGTTTAG AGATGTTCAG
GGCATACCCA CTTACGAGGA AAGATATGAA GACATAATAA GGAGGGCTCG AAAATGA
|
|---|
| Protein sequence | MNPMEEMRKE QEKLLRTDRL PHVWCPGCGI GIVLNAFLRA FIRSKMDPNK LVVVSGIGCT
GRAAGYVNVD SFHTTHGRGI PFAVGIKFAR PDLNVVVFSG DGDLFAIGGN HFVNAARRNH
DLLIIAVNNF TYGMTGGQHG PTTPTGAYTT TTPYGNPDRP FNIPHLAISL GAPYVARWTT
YHVNQIQNSI YHALHKKGFR VIEIISQCPT VYGRRNDMKT PLEMMHYFQK NSVRKDDASF
EELELSYNGK IVVGVFRDVQ GIPTYEERYE DIIRRARK
|
|---|
| |