Gene Aboo_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0056 
Symbol 
ID8826992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp56704 
End bp57846 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content37% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003482430 
Protein GI289595734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTTCA CATATGCCTC TTCTATATCT TTAGTGGCCA CTGTGATAAG CGCAGTCCTA 
GTGTATCTTA TACTTAAAGC GAATATTAAA AAACCAGGTA ACCTTGCCGC TTTTGTGATG
TTTTTGGGAG TTTTAATATG GAGCTTTGGA GAACTACTTG AGAGAATTGC TGGACCCCCT
CCCGCTGATG AAACTCTTGC TTATTTGGGG GCCTTAACTC TCTGTGTTGG AATATTTATA
ACTCCTGCGG GATTGATACA TTTTGCGATA GATTATCCGT ATAGAATAAA AATGAAAGCA
TCAACTCGCA AGTACATTCT ATATGCAGTT TATATTCTCT CTTTTGTTGG AATAGCACTC
ATACCATTCA ATAGTTTACT TGGGAATATA GTAATCAGAG GTGTAAGCCC TTACAATGCT
CTTGGTATAA TTATTTGGGG ATTAGAATCG TCAGTATTGC ATAAGTTCTT TGCAACATGG
GATTTTATAG CTGCTTTGAT AATGATAGGT ATCCTCGTAA TGAAACTAAA GGGAGTGGAT
ATGTATATAA TAAAAAATCA AATCATTATA ACTCTCATTG GATTCCTAAT AATGTTCTTT
ATGGTCGTTT TTACATCCTT TGTCCCAACT ATGATGAATA TAAATATGTA TCCCCTAAAT
ACACTTGCAT TTTCAATATT TGGCTTGTTC GTCATATACA CTGTGCATAG ATACAGGCTA
TTTTTGGTAG CACCTGTTCA AGAAGAAGCT GTTGAGAGTG AAGAGATGCC AGATATGGGA
ATATACGAAA TGAAAAAAGA TGAGGCGTAT CATAAATTCA TGTTGCTGGT GAAATCTGGT
AATACGGGTG TTGCTTTCAT ATCTGAGAAT GCCGAGGATT TCAAGAAAAA GCATGGCCTG
AAAAATACAT CTATTTACGA GATAAGCAAA GAAGGGGGCA AGAATAGGTT AAATCCAGAA
AATAAGGAGC ATATGGAGAT GATAGGGTTT ATAATAACAT CTCTGCTGGA GCAGGTATAC
AAGCCGGTGA TACTTTTAGA CCTCTCAGAG CCTTGGTTAA AGGAGGAGAC CCGCAAAATA
CTAAAGGAAA AGATCCAGAA CATTTCCTCG GTCTATGGCG GAGTATATCT TCTAGTAGGA
TAA
 
Protein sequence
MWFTYASSIS LVATVISAVL VYLILKANIK KPGNLAAFVM FLGVLIWSFG ELLERIAGPP 
PADETLAYLG ALTLCVGIFI TPAGLIHFAI DYPYRIKMKA STRKYILYAV YILSFVGIAL
IPFNSLLGNI VIRGVSPYNA LGIIIWGLES SVLHKFFATW DFIAALIMIG ILVMKLKGVD
MYIIKNQIII TLIGFLIMFF MVVFTSFVPT MMNINMYPLN TLAFSIFGLF VIYTVHRYRL
FLVAPVQEEA VESEEMPDMG IYEMKKDEAY HKFMLLVKSG NTGVAFISEN AEDFKKKHGL
KNTSIYEISK EGGKNRLNPE NKEHMEMIGF IITSLLEQVY KPVILLDLSE PWLKEETRKI
LKEKIQNISS VYGGVYLLVG