Gene Aboo_0049 details

Gene Information

• Locus tag: Aboo_0049
• ID: 8826984
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 49451
• End bp: 50113
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 34%
• Product: Zinc finger TFIIB-type domain protein
• Protein accession: YP_003482423
• Protein GI: 289595727

Plasmid Coverage information

• Num covering plasmid clones: 63
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATGCC CAATTTGTGG CTCAACAAAT GTTACGAAAC TTAAAACTGG AAGCTATAGA 
TGCAATGATT GCGGTTTTGT GTTTTACCCT ACTCGAGAGG TAATAATAGA TATGCGAGAC 
CTTCTAACTG GAGATGAATT AACAGAGGAG GAGATAAATG AATTAGGAGA AAAGATAAAG 
GAGCAAACTG AGAATGTGAG TGAGAAAATT TTTGGAAAGA GTGCCAAGAA TGTTTTCAGA 
GCATTAAGCT CTCTGGATGA GATTTTAGCT CAATATAATG AAGATGATAG GGTGTTTGGC 
ATATTTGCCG ATTTTTCAGG AAGTGTTAAA GGCACTGTTA TGATAATGGT TCAAGAGAAC 
GAAATTGACA TAATAAAGAA AATTTACAGA AAAAAAGAGG TTATAGAAGC ACTAAAACAA 
CTGGGAAAAG AAACGGCAGA AGGATTTAAA GAGATATTTC AAGATGATCT ATTTCTTGAG 
GGAGTGGATA TTGCCTACGA TACCATACCC TCCATTATAA ATTATCTAAT TTCAGAGATC 
GCTGGGGAAA GAAATATGAT TTTAAATGTA AAAATGATCG TGGATAAAGC ACCAAAGGGA 
GAAATAATAT TTGTTCCTCA AAAAGATAGC ATAAAATATT TAAAGAGTGT GCTTGGGAAC 
TGA 

 

Protein sequence

MKCPICGSTN VTKLKTGSYR CNDCGFVFYP TREVIIDMRD LLTGDELTEE EINELGEKIK 
EQTENVSEKI FGKSAKNVFR ALSSLDEILA QYNEDDRVFG IFADFSGSVK GTVMIMVQEN 
EIDIIKKIYR KKEVIEALKQ LGKETAEGFK EIFQDDLFLE GVDIAYDTIP SIINYLISEI 
AGERNMILNV KMIVDKAPKG EIIFVPQKDS IKYLKSVLGN