Gene Aboo_0043 details

Gene Information

• Locus tag: Aboo_0043
• ID: 8826978
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 45436
• End bp: 46143
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 38%
• Product: RNA methyltransferase, TrmH family, group 1
• Protein accession: YP_003482417
• Protein GI: 289595721

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGATTC ATATTGTATT CGTTGAGCCA CAATTCACAG GCAATATAGG ATTCTTAGCT 
CGCACAATGG CCAATTTTGG ATTCAAGAAT TTAATATTGG TAAATCCTCC AGAGTTGGAT 
GAGGACGCTT ATCGTTTTTC AAAGCACGCA AGATACATAA TTGAAAATGC GGAGATATTG 
AACAACTTTG AAGAATTGAG GAGATCTCTT GATTATTTAG TTGCTACAAG TGGAGTTAGT 
ACAAAATCAC CTAAAAAATT TAAAAGGATA GCCCTAACAC CCAGGGAATT TGCCCAGAAG 
GTTTGGAATT TCTCAGGGAA TATTGGGATA GTGTTTGGTC GCGAGAATTA TGGCCTTTAC 
AATGAGGAGA TTGAAAAATG CGATTCATTA ATCACTATTC CAACCAGCGA GGAATATCCA 
ATCATGAACA TCACACATGC GGCAGCCATT ATTCTCTACG AGATTTTTAT GGAGAAGAGG 
GAGGAAGAAG GTATGCCCTT GGCGGAGGAA TTTGAATTAA ATCTCTTAAA TGAGAGATTC 
TCAGAGCTTT TAGGACTCAT AAATTTCCCA GATCATAAAA GGAAAAATAC AGAAGTTATG 
TTCCGCAGGA TAATTGGCAG AGCGATGCTT ACAAAATGGG AGTATCACAG CATGATGGGG 
GTTATGAAGA GAATAATTTA CGCCATACAA GCCAAGGATG ATTATTAA 

 

Protein sequence

MQIHIVFVEP QFTGNIGFLA RTMANFGFKN LILVNPPELD EDAYRFSKHA RYIIENAEIL 
NNFEELRRSL DYLVATSGVS TKSPKKFKRI ALTPREFAQK VWNFSGNIGI VFGRENYGLY 
NEEIEKCDSL ITIPTSEEYP IMNITHAAAI ILYEIFMEKR EEEGMPLAEE FELNLLNERF 
SELLGLINFP DHKRKNTEVM FRRIIGRAML TKWEYHSMMG VMKRIIYAIQ AKDDY