Gene Aboo_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0043 
Symbol 
ID8826978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp45436 
End bp46143 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content38% 
IMG OID 
ProductRNA methyltransferase, TrmH family, group 1 
Protein accessionYP_003482417 
Protein GI289595721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGATTC ATATTGTATT CGTTGAGCCA CAATTCACAG GCAATATAGG ATTCTTAGCT 
CGCACAATGG CCAATTTTGG ATTCAAGAAT TTAATATTGG TAAATCCTCC AGAGTTGGAT
GAGGACGCTT ATCGTTTTTC AAAGCACGCA AGATACATAA TTGAAAATGC GGAGATATTG
AACAACTTTG AAGAATTGAG GAGATCTCTT GATTATTTAG TTGCTACAAG TGGAGTTAGT
ACAAAATCAC CTAAAAAATT TAAAAGGATA GCCCTAACAC CCAGGGAATT TGCCCAGAAG
GTTTGGAATT TCTCAGGGAA TATTGGGATA GTGTTTGGTC GCGAGAATTA TGGCCTTTAC
AATGAGGAGA TTGAAAAATG CGATTCATTA ATCACTATTC CAACCAGCGA GGAATATCCA
ATCATGAACA TCACACATGC GGCAGCCATT ATTCTCTACG AGATTTTTAT GGAGAAGAGG
GAGGAAGAAG GTATGCCCTT GGCGGAGGAA TTTGAATTAA ATCTCTTAAA TGAGAGATTC
TCAGAGCTTT TAGGACTCAT AAATTTCCCA GATCATAAAA GGAAAAATAC AGAAGTTATG
TTCCGCAGGA TAATTGGCAG AGCGATGCTT ACAAAATGGG AGTATCACAG CATGATGGGG
GTTATGAAGA GAATAATTTA CGCCATACAA GCCAAGGATG ATTATTAA
 
Protein sequence
MQIHIVFVEP QFTGNIGFLA RTMANFGFKN LILVNPPELD EDAYRFSKHA RYIIENAEIL 
NNFEELRRSL DYLVATSGVS TKSPKKFKRI ALTPREFAQK VWNFSGNIGI VFGRENYGLY
NEEIEKCDSL ITIPTSEEYP IMNITHAAAI ILYEIFMEKR EEEGMPLAEE FELNLLNERF
SELLGLINFP DHKRKNTEVM FRRIIGRAML TKWEYHSMMG VMKRIIYAIQ AKDDY