| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0021 |
|---|
| Symbol | |
|---|
| ID | 8826955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aciduliprofundum boonei T469 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013926 |
|---|
| Strand | + |
|---|
| Start bp | 30851 |
|---|
| End bp | 31888 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003482395 |
|---|
| Protein GI | 289595699 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA ATGATGTTGA GAAGAGAATC ATCTGTGCCC TGTGTAAAAA TCCCGATATG
TCGGCGAGAG AACTTGCAGA ATTTTTAGAT TTAAATTATT GGACAGTATA CAAAAGCATT
AATAAGATGA GGGGAAAAGG AATATTCAAA GAAACAATAA TTCCAAATTT TAAAGCCCTT
GGATTTGAGC TTTTAGTTAT TGGATATGGA AGTTTAACAA AAAAGAAGAT GGACGTGCTA
CAAGAGGTCA AAACTCTAAA AACGAATCTT AAATTCTCTT CTGGTGTATT TTATTCATTT
GCGGAATCTT ACAGAGGATT CGTGCTCGCC GTGTCCAAGA ACTATACAGA GGTTGTAAAG
GGATTGATTT ATGCAGAGAG ATTGATTCGT GTTAGGGAAT TTCTTAAAGG GGAGAACACA
GAGATGGTAA TACTGCCCTT TGAAATAACA GAAATTCCAT TATTTTTTGA TTATTCAAAT
CTCATATGCA AAGAATTCAA GTTGGATTTA GAAAAGAGAG GTGAGAGGAA GGAAAGAATG
AAAAAACTCA GTATGAAAAA TGCTAAAGTC ATGATGGAGA TTGTTAAGAA TCCCGAAGCA
AAAATTTTAC ATATTGCCAA GAGATTAAAT ATGGCTCCCC AAAGTGTCTC AAAAATCAAA
GATAGATTAT TTGCAGAAGG TTATGTATCT AAAAAAATAA TCCCAAACCT TCCCTTGCTT
GGATACGATG TGCTGGTATT CGCTCACTGG AATTCAAATC CAGAAGTTAT GGAAAAAATG
CAAAATATAA AAATAGAGGC TCTCGGATAT GACATGTCAA ATGTAATCTT TACGGCTTAC
AATTCCCTCG AAGGTGTTGC CATAGCACCT TTCAAATCCC TTAAAGAGAG CAGAGATATA
GTATCTTTCT TTGAAAATTT CGGTGAAGAG ACCGGAGTGC TAACTAAAGA GCCAAATATC
CTATTTCTTT CACTTCAAGA GGGAGTTGCA ATGCGGGATC ACGAGTACTA TCCAATTTTA
GCCTCAATTT TTAAGTAG
|
|---|
| Protein sequence | MKLNDVEKRI ICALCKNPDM SARELAEFLD LNYWTVYKSI NKMRGKGIFK ETIIPNFKAL
GFELLVIGYG SLTKKKMDVL QEVKTLKTNL KFSSGVFYSF AESYRGFVLA VSKNYTEVVK
GLIYAERLIR VREFLKGENT EMVILPFEIT EIPLFFDYSN LICKEFKLDL EKRGERKERM
KKLSMKNAKV MMEIVKNPEA KILHIAKRLN MAPQSVSKIK DRLFAEGYVS KKIIPNLPLL
GYDVLVFAHW NSNPEVMEKM QNIKIEALGY DMSNVIFTAY NSLEGVAIAP FKSLKESRDI
VSFFENFGEE TGVLTKEPNI LFLSLQEGVA MRDHEYYPIL ASIFK
|
|---|
| |