Gene Aboo_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0020 
Symbol 
ID8826954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp26625 
End bp30704 
Gene Length4080 bp 
Protein Length1359 aa 
Translation table11 
GC content38% 
IMG OID 
ProductPatched family protein 
Protein accessionYP_003482394 
Protein GI289595698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.637086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTGA GAGCTCTTGG AAATTTGGTA AGTAAGAGGC CCGTGGCTAC GATAATAGTA 
ATACTTCTCA TAACATCCAT ATTTGGATTC TATACTGCCC AGATGCAGAT GAGTGCAGAT
CTTAGTACTT TCCTTCCAAA TGATGAAATG GTTAAGGCCC AGATGAAAGT GAGTGAGAAT
TTCGGTGATA CGGATATTGT TCAGGTTATA GTTGTATCAA ATAACACGCT TTCTAAATCA
TCCTTGATGG ATATGCTTAC AATTGAGGAG AATTTGCAAA ATGATAGCAT TATATCCAAG
AATTTGAGAA CTCCAAACTC TCCGAGCGAG AGTATAATAT CCCCCGCGGA TATCATTATA
ATGGGTAATA TAACTCTTAA TTTTGAAAAT AAACTTACTG AATTGCTTAA AAATATGAGC
GCTGAGATGA AGGGTCTTAA TTTCACAGTT GCCCTTATAC CCATGAGGAT GATGAACTCT
GTTATGAGTG ATTACAGGGA TATTTACGAA AATGCTACAG ATATAAGAGA TGATGCAAAA
GACATAGTTC TTTTGATGTT CTCTAAACCA TCTTCAAATG AAACTGGTAT GGGTAAGATT
GAGCCACTTT TGCAGAATTT GACCTATGTG CTTACCCAAT CTAATAATTT CTCTGTAAAA
TCGAAGGTAT TGACTATGCT CACTCCTCCT TTGGGAAATT CAACACTCGG AAATGAAAGT
ATGAATCCGT TGTTCAAATA TTTTGTGGAG GATATACTTT CAAATATGAG CTTGGAGAAT
AAGAGTATCT CTGTGCATTA TTTCTCTCTC ACAAATACTT TTACGGAAAG TTCGTTGGAT
TACTCGCTCT CCTCTATAAA TTCAGCCATA GATGGAAATA ATCAGCTTAT AAATGCTTTG
AATATGGTGA AAGGTAGTAT TATGAGTGGG GACAATGCCA CCGCTTTATA CATAATGAAT
AAAACGATTG AAGGTGTATC TTCGAATATT GCCCATATGT CTTTTGCGTA CCCATATTAT
TATTCATTTA ACAATTCACT CTCAAAGTTT CTCTACGATT TCAAAATGGG AACACTGACA
CCACAGGATG TAGAGAGTTT GAAAGAGAAT ACATCTGCTA TGCTTACCAT ATCTTCTGGA
GAGTTTAAAA ATATGCTACA AATTTTGTAT GATACATTGA ATCAGTGGAC ACAGAGCAAT
TACATATCTT ATGATCTTTT ATACGAGGCA AATTCAACGC TTCCAGCGGT GCAGGGATTC
TTGCAGAATT ATCAAGGAGC CATTATGCTT AATAATTCTT TAACGAGTAT AAAGATGGAA
ATAAATTATG CTCCTGTAGG AAATACAACT GCACATATTG AGTATCTCAT AGGATATTTG
AAAAATGCTA ATGCGGAGTT GGAGAAGCAG AAGGAGTTTA TAGAGAATGC TATGGGTGCC
ATGGACACAC CATACTATCG CTGGTACACA CAGATGCTCT CTGATTTAGA TTATGTTTTG
TACAACTCAA ATGTGGCAGA CTACGCTATG AATATTTTTG TGTTCACCCT TCAAATGATG
AATGAAGGAG CTCAAGGAGG GAATATGGGT GATTTTACGA TATTTTATTC TTTAAAGCAT
GCTTTTGATT CCAATGTCGC TCCTAAGTAT AAAGAGGAGA TACAGAGTAT GTACCTAACC
ATAATGGGAA TGATGAAAAT AGGAAAGGGA TATGAAGGAG AGATGCCTTC AATGCCCTCC
TCTCCAAGTA TCAAATTGCC TAATTTAAAT CCATCATATG CGGAGAAAAA GAATATACTC
AAAAATATGA GTTATGAAGA CATAACCAAA ACTGTTTCAA GCATTGAAAA TTACAATGCA
TCAGAGTTTA TGAATACCGT TAATTCCACA ATACCAATAG TGGAAAATGC AAGTGCCAAC
ATGAGCAGTT TTGCAAACGA TATAGAAAAG TTAGTAAATA ATATGGAGTT TGTTTATTCC
ACCACTGGGG ACTATAATGT TAGCAACATG CTCAAAATGT ATACGCAACT TCACGCGAAT
ATATCTGCGG CTTCTAATGC CCTAGATTCC TTATCTTCAA ATTTGCCGCA TATGAGTGGA
TTTACCTATA TGATGCACAG ATTCTCAGGA CAATTAAAAA CTATGTTTTC TAAAGATTTT
AATGGTAAAA CTGCGAAGGC AGCAATGCTC ATCGTTATGC TCAATGACAC CAGATTACCC
GGAGAGAGTG ATGCCCAGCA TAGTAAGAGA ATGGAAGCTT TAGAGGAGAG AGTTGAAAGC
ATAGCAAAGG AATCGGATAT CTCTAGCAAA GTTATGGTAA TGGGTACTTA TCTAATTTCA
CAGGCAACGG AGAAGACCTC CAATGAAACG ATGAATGTCA TATTTCCAAT AGCGATAATA
CTTGTTATTG TCATTCTTCT CATAACATTC AGAAGCATAG TTGATACACT CCTTGGTATA
CTGGGTCTGG GGATGGCCAT ATCCTGGGCA TATGGATTTG GAGTTATAAT GAATTACAAC
TTCAATCAGA TAAGCACCAC TGTAGCGGTT CTCTTGGTTG GATTGGGTAT AGATTATGCC
ATACATACTA TTTTGCGTTA TAGAGAAGAA CTGAGAAAGG GTAGAAAGGT AAGAGATGCC
ATGAACGAGA TGATAACTCA TTTGGGGATG GGTCTTATTT TAGCAACGAT CACTACAATA
ATAGCGTTCC TTTCAAATGT TTCCTCGCCT ATCCCTCCAG TTAGTGATTT TGGAATAATG
AATGCTGTAG GTATATTTGG CGCGTTCGTA ATATTCACAA CAGCGATTCC GGCGATGAAA
ATACTTATTG ATGAACGCAG AGAAAAGAAG GGAAAATTGA AGATAAAGAA AGAGAAAGAA
AGAGAGGGCT CAGGACTTAT AGTACTGAAT AAATTTATGG CTTTGAGTGC AATGGCAGCG
GAGCATCACA GAATTGCAGT TATCGCGGCA GTTTTGCTCA TAAGTGGCGT GGCTATTTAC
GGAGGAATGA ATGTTAACAC CACATTTGAT TTGAAGGATT TTCTACCGCA GAATTTAGAG
ATAACTGATA CTATAAACTT TATGATGGAT CATTTTAACG CCTCTGGAAT GAGTGATAAT
TATGTTCTCA TTGAAGGAAA TATCACTTCA CCTTCGGCTT TGAAAGCAGT CCAGGCAACC
ATGCAAAATC TGAAAGATGA TGATTATGTT GATTATTCTC AATCTTCAAG CATTACTACT
CTTATCTCTG AGTGGAAAGA GAAGAATAGC ACATTTGCGA AGATGGTGAG TGGTAACGAT
ACAAATGGAG ATGGTTTACC AGATAAAAAT ATCAAGGCAA TATATGACTG GCTGTACGAG
AACGCAAATG GGAAATCAAT ACTTCATAAG AGCAATGGCA CATATGATTC AATGCTCATC
ATAATTCGCA GCTCTGCAAG CAACGACAAG GAAAATAAGA TACTTACGAA AGAGATAGAT
GAGGATATTC AGCCTCTGAA AGATGCGGGA TTGAAGGCCA TACCCACTGG TACAAATCTT
CTCACATTCC ACATTCTTGA TATGCTAGAG GGTAGCCAAT GGCGCTCTCT GATGATAACG
GTGATTGCAT CCCTAATAGT CCTTACAATA GTGTTCTTGT ACGAGAAAAG GAGCTGGATT
CTTGGATTAA TAACATCGAT TCCTGTTGTG TTAGCTCTAC TCTGGCTTCT TGGAAGCATG
TATGCTTTGG GCATAAATTT CAATGTAGTA ACAGTTACCA TAACCTCTTT GACGATAGGT
CTTGGAATTA CCTATGCAAT TCATATAACT CACAGATTCT TGGAAGATTG GGAGAGAGAG
AAGAGCATAG AAGATGCAGT GAAGAAAACG GTTAGACATA CTGGTACATC TATATTCGGT
GCTGCTGCTA CCACTATGGC GGGATTTGGA ACTTTGATGT TATCTTCAAT GCCTCCAATA
CAGCAGTTTG GGGAAATTGC CGCACTCTCA ATTCTATACA GCTTTGTTCT CTCAGTGTTC
ATACTTCCAA CATTCCTATA TATGTGGGCA TCATGGAGGG AGAAAAGAAA CAAACTCTGA
 
Protein sequence
MELRALGNLV SKRPVATIIV ILLITSIFGF YTAQMQMSAD LSTFLPNDEM VKAQMKVSEN 
FGDTDIVQVI VVSNNTLSKS SLMDMLTIEE NLQNDSIISK NLRTPNSPSE SIISPADIII
MGNITLNFEN KLTELLKNMS AEMKGLNFTV ALIPMRMMNS VMSDYRDIYE NATDIRDDAK
DIVLLMFSKP SSNETGMGKI EPLLQNLTYV LTQSNNFSVK SKVLTMLTPP LGNSTLGNES
MNPLFKYFVE DILSNMSLEN KSISVHYFSL TNTFTESSLD YSLSSINSAI DGNNQLINAL
NMVKGSIMSG DNATALYIMN KTIEGVSSNI AHMSFAYPYY YSFNNSLSKF LYDFKMGTLT
PQDVESLKEN TSAMLTISSG EFKNMLQILY DTLNQWTQSN YISYDLLYEA NSTLPAVQGF
LQNYQGAIML NNSLTSIKME INYAPVGNTT AHIEYLIGYL KNANAELEKQ KEFIENAMGA
MDTPYYRWYT QMLSDLDYVL YNSNVADYAM NIFVFTLQMM NEGAQGGNMG DFTIFYSLKH
AFDSNVAPKY KEEIQSMYLT IMGMMKIGKG YEGEMPSMPS SPSIKLPNLN PSYAEKKNIL
KNMSYEDITK TVSSIENYNA SEFMNTVNST IPIVENASAN MSSFANDIEK LVNNMEFVYS
TTGDYNVSNM LKMYTQLHAN ISAASNALDS LSSNLPHMSG FTYMMHRFSG QLKTMFSKDF
NGKTAKAAML IVMLNDTRLP GESDAQHSKR MEALEERVES IAKESDISSK VMVMGTYLIS
QATEKTSNET MNVIFPIAII LVIVILLITF RSIVDTLLGI LGLGMAISWA YGFGVIMNYN
FNQISTTVAV LLVGLGIDYA IHTILRYREE LRKGRKVRDA MNEMITHLGM GLILATITTI
IAFLSNVSSP IPPVSDFGIM NAVGIFGAFV IFTTAIPAMK ILIDERREKK GKLKIKKEKE
REGSGLIVLN KFMALSAMAA EHHRIAVIAA VLLISGVAIY GGMNVNTTFD LKDFLPQNLE
ITDTINFMMD HFNASGMSDN YVLIEGNITS PSALKAVQAT MQNLKDDDYV DYSQSSSITT
LISEWKEKNS TFAKMVSGND TNGDGLPDKN IKAIYDWLYE NANGKSILHK SNGTYDSMLI
IIRSSASNDK ENKILTKEID EDIQPLKDAG LKAIPTGTNL LTFHILDMLE GSQWRSLMIT
VIASLIVLTI VFLYEKRSWI LGLITSIPVV LALLWLLGSM YALGINFNVV TVTITSLTIG
LGITYAIHIT HRFLEDWERE KSIEDAVKKT VRHTGTSIFG AAATTMAGFG TLMLSSMPPI
QQFGEIAALS ILYSFVLSVF ILPTFLYMWA SWREKRNKL