| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0020 |
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| Symbol | |
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| ID | 8826954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | - |
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| Start bp | 26625 |
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| End bp | 30704 |
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| Gene Length | 4080 bp |
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| Protein Length | 1359 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | Patched family protein |
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| Protein accession | YP_003482394 |
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| Protein GI | 289595698 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.637086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTGA GAGCTCTTGG AAATTTGGTA AGTAAGAGGC CCGTGGCTAC GATAATAGTA
ATACTTCTCA TAACATCCAT ATTTGGATTC TATACTGCCC AGATGCAGAT GAGTGCAGAT
CTTAGTACTT TCCTTCCAAA TGATGAAATG GTTAAGGCCC AGATGAAAGT GAGTGAGAAT
TTCGGTGATA CGGATATTGT TCAGGTTATA GTTGTATCAA ATAACACGCT TTCTAAATCA
TCCTTGATGG ATATGCTTAC AATTGAGGAG AATTTGCAAA ATGATAGCAT TATATCCAAG
AATTTGAGAA CTCCAAACTC TCCGAGCGAG AGTATAATAT CCCCCGCGGA TATCATTATA
ATGGGTAATA TAACTCTTAA TTTTGAAAAT AAACTTACTG AATTGCTTAA AAATATGAGC
GCTGAGATGA AGGGTCTTAA TTTCACAGTT GCCCTTATAC CCATGAGGAT GATGAACTCT
GTTATGAGTG ATTACAGGGA TATTTACGAA AATGCTACAG ATATAAGAGA TGATGCAAAA
GACATAGTTC TTTTGATGTT CTCTAAACCA TCTTCAAATG AAACTGGTAT GGGTAAGATT
GAGCCACTTT TGCAGAATTT GACCTATGTG CTTACCCAAT CTAATAATTT CTCTGTAAAA
TCGAAGGTAT TGACTATGCT CACTCCTCCT TTGGGAAATT CAACACTCGG AAATGAAAGT
ATGAATCCGT TGTTCAAATA TTTTGTGGAG GATATACTTT CAAATATGAG CTTGGAGAAT
AAGAGTATCT CTGTGCATTA TTTCTCTCTC ACAAATACTT TTACGGAAAG TTCGTTGGAT
TACTCGCTCT CCTCTATAAA TTCAGCCATA GATGGAAATA ATCAGCTTAT AAATGCTTTG
AATATGGTGA AAGGTAGTAT TATGAGTGGG GACAATGCCA CCGCTTTATA CATAATGAAT
AAAACGATTG AAGGTGTATC TTCGAATATT GCCCATATGT CTTTTGCGTA CCCATATTAT
TATTCATTTA ACAATTCACT CTCAAAGTTT CTCTACGATT TCAAAATGGG AACACTGACA
CCACAGGATG TAGAGAGTTT GAAAGAGAAT ACATCTGCTA TGCTTACCAT ATCTTCTGGA
GAGTTTAAAA ATATGCTACA AATTTTGTAT GATACATTGA ATCAGTGGAC ACAGAGCAAT
TACATATCTT ATGATCTTTT ATACGAGGCA AATTCAACGC TTCCAGCGGT GCAGGGATTC
TTGCAGAATT ATCAAGGAGC CATTATGCTT AATAATTCTT TAACGAGTAT AAAGATGGAA
ATAAATTATG CTCCTGTAGG AAATACAACT GCACATATTG AGTATCTCAT AGGATATTTG
AAAAATGCTA ATGCGGAGTT GGAGAAGCAG AAGGAGTTTA TAGAGAATGC TATGGGTGCC
ATGGACACAC CATACTATCG CTGGTACACA CAGATGCTCT CTGATTTAGA TTATGTTTTG
TACAACTCAA ATGTGGCAGA CTACGCTATG AATATTTTTG TGTTCACCCT TCAAATGATG
AATGAAGGAG CTCAAGGAGG GAATATGGGT GATTTTACGA TATTTTATTC TTTAAAGCAT
GCTTTTGATT CCAATGTCGC TCCTAAGTAT AAAGAGGAGA TACAGAGTAT GTACCTAACC
ATAATGGGAA TGATGAAAAT AGGAAAGGGA TATGAAGGAG AGATGCCTTC AATGCCCTCC
TCTCCAAGTA TCAAATTGCC TAATTTAAAT CCATCATATG CGGAGAAAAA GAATATACTC
AAAAATATGA GTTATGAAGA CATAACCAAA ACTGTTTCAA GCATTGAAAA TTACAATGCA
TCAGAGTTTA TGAATACCGT TAATTCCACA ATACCAATAG TGGAAAATGC AAGTGCCAAC
ATGAGCAGTT TTGCAAACGA TATAGAAAAG TTAGTAAATA ATATGGAGTT TGTTTATTCC
ACCACTGGGG ACTATAATGT TAGCAACATG CTCAAAATGT ATACGCAACT TCACGCGAAT
ATATCTGCGG CTTCTAATGC CCTAGATTCC TTATCTTCAA ATTTGCCGCA TATGAGTGGA
TTTACCTATA TGATGCACAG ATTCTCAGGA CAATTAAAAA CTATGTTTTC TAAAGATTTT
AATGGTAAAA CTGCGAAGGC AGCAATGCTC ATCGTTATGC TCAATGACAC CAGATTACCC
GGAGAGAGTG ATGCCCAGCA TAGTAAGAGA ATGGAAGCTT TAGAGGAGAG AGTTGAAAGC
ATAGCAAAGG AATCGGATAT CTCTAGCAAA GTTATGGTAA TGGGTACTTA TCTAATTTCA
CAGGCAACGG AGAAGACCTC CAATGAAACG ATGAATGTCA TATTTCCAAT AGCGATAATA
CTTGTTATTG TCATTCTTCT CATAACATTC AGAAGCATAG TTGATACACT CCTTGGTATA
CTGGGTCTGG GGATGGCCAT ATCCTGGGCA TATGGATTTG GAGTTATAAT GAATTACAAC
TTCAATCAGA TAAGCACCAC TGTAGCGGTT CTCTTGGTTG GATTGGGTAT AGATTATGCC
ATACATACTA TTTTGCGTTA TAGAGAAGAA CTGAGAAAGG GTAGAAAGGT AAGAGATGCC
ATGAACGAGA TGATAACTCA TTTGGGGATG GGTCTTATTT TAGCAACGAT CACTACAATA
ATAGCGTTCC TTTCAAATGT TTCCTCGCCT ATCCCTCCAG TTAGTGATTT TGGAATAATG
AATGCTGTAG GTATATTTGG CGCGTTCGTA ATATTCACAA CAGCGATTCC GGCGATGAAA
ATACTTATTG ATGAACGCAG AGAAAAGAAG GGAAAATTGA AGATAAAGAA AGAGAAAGAA
AGAGAGGGCT CAGGACTTAT AGTACTGAAT AAATTTATGG CTTTGAGTGC AATGGCAGCG
GAGCATCACA GAATTGCAGT TATCGCGGCA GTTTTGCTCA TAAGTGGCGT GGCTATTTAC
GGAGGAATGA ATGTTAACAC CACATTTGAT TTGAAGGATT TTCTACCGCA GAATTTAGAG
ATAACTGATA CTATAAACTT TATGATGGAT CATTTTAACG CCTCTGGAAT GAGTGATAAT
TATGTTCTCA TTGAAGGAAA TATCACTTCA CCTTCGGCTT TGAAAGCAGT CCAGGCAACC
ATGCAAAATC TGAAAGATGA TGATTATGTT GATTATTCTC AATCTTCAAG CATTACTACT
CTTATCTCTG AGTGGAAAGA GAAGAATAGC ACATTTGCGA AGATGGTGAG TGGTAACGAT
ACAAATGGAG ATGGTTTACC AGATAAAAAT ATCAAGGCAA TATATGACTG GCTGTACGAG
AACGCAAATG GGAAATCAAT ACTTCATAAG AGCAATGGCA CATATGATTC AATGCTCATC
ATAATTCGCA GCTCTGCAAG CAACGACAAG GAAAATAAGA TACTTACGAA AGAGATAGAT
GAGGATATTC AGCCTCTGAA AGATGCGGGA TTGAAGGCCA TACCCACTGG TACAAATCTT
CTCACATTCC ACATTCTTGA TATGCTAGAG GGTAGCCAAT GGCGCTCTCT GATGATAACG
GTGATTGCAT CCCTAATAGT CCTTACAATA GTGTTCTTGT ACGAGAAAAG GAGCTGGATT
CTTGGATTAA TAACATCGAT TCCTGTTGTG TTAGCTCTAC TCTGGCTTCT TGGAAGCATG
TATGCTTTGG GCATAAATTT CAATGTAGTA ACAGTTACCA TAACCTCTTT GACGATAGGT
CTTGGAATTA CCTATGCAAT TCATATAACT CACAGATTCT TGGAAGATTG GGAGAGAGAG
AAGAGCATAG AAGATGCAGT GAAGAAAACG GTTAGACATA CTGGTACATC TATATTCGGT
GCTGCTGCTA CCACTATGGC GGGATTTGGA ACTTTGATGT TATCTTCAAT GCCTCCAATA
CAGCAGTTTG GGGAAATTGC CGCACTCTCA ATTCTATACA GCTTTGTTCT CTCAGTGTTC
ATACTTCCAA CATTCCTATA TATGTGGGCA TCATGGAGGG AGAAAAGAAA CAAACTCTGA
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| Protein sequence | MELRALGNLV SKRPVATIIV ILLITSIFGF YTAQMQMSAD LSTFLPNDEM VKAQMKVSEN
FGDTDIVQVI VVSNNTLSKS SLMDMLTIEE NLQNDSIISK NLRTPNSPSE SIISPADIII
MGNITLNFEN KLTELLKNMS AEMKGLNFTV ALIPMRMMNS VMSDYRDIYE NATDIRDDAK
DIVLLMFSKP SSNETGMGKI EPLLQNLTYV LTQSNNFSVK SKVLTMLTPP LGNSTLGNES
MNPLFKYFVE DILSNMSLEN KSISVHYFSL TNTFTESSLD YSLSSINSAI DGNNQLINAL
NMVKGSIMSG DNATALYIMN KTIEGVSSNI AHMSFAYPYY YSFNNSLSKF LYDFKMGTLT
PQDVESLKEN TSAMLTISSG EFKNMLQILY DTLNQWTQSN YISYDLLYEA NSTLPAVQGF
LQNYQGAIML NNSLTSIKME INYAPVGNTT AHIEYLIGYL KNANAELEKQ KEFIENAMGA
MDTPYYRWYT QMLSDLDYVL YNSNVADYAM NIFVFTLQMM NEGAQGGNMG DFTIFYSLKH
AFDSNVAPKY KEEIQSMYLT IMGMMKIGKG YEGEMPSMPS SPSIKLPNLN PSYAEKKNIL
KNMSYEDITK TVSSIENYNA SEFMNTVNST IPIVENASAN MSSFANDIEK LVNNMEFVYS
TTGDYNVSNM LKMYTQLHAN ISAASNALDS LSSNLPHMSG FTYMMHRFSG QLKTMFSKDF
NGKTAKAAML IVMLNDTRLP GESDAQHSKR MEALEERVES IAKESDISSK VMVMGTYLIS
QATEKTSNET MNVIFPIAII LVIVILLITF RSIVDTLLGI LGLGMAISWA YGFGVIMNYN
FNQISTTVAV LLVGLGIDYA IHTILRYREE LRKGRKVRDA MNEMITHLGM GLILATITTI
IAFLSNVSSP IPPVSDFGIM NAVGIFGAFV IFTTAIPAMK ILIDERREKK GKLKIKKEKE
REGSGLIVLN KFMALSAMAA EHHRIAVIAA VLLISGVAIY GGMNVNTTFD LKDFLPQNLE
ITDTINFMMD HFNASGMSDN YVLIEGNITS PSALKAVQAT MQNLKDDDYV DYSQSSSITT
LISEWKEKNS TFAKMVSGND TNGDGLPDKN IKAIYDWLYE NANGKSILHK SNGTYDSMLI
IIRSSASNDK ENKILTKEID EDIQPLKDAG LKAIPTGTNL LTFHILDMLE GSQWRSLMIT
VIASLIVLTI VFLYEKRSWI LGLITSIPVV LALLWLLGSM YALGINFNVV TVTITSLTIG
LGITYAIHIT HRFLEDWERE KSIEDAVKKT VRHTGTSIFG AAATTMAGFG TLMLSSMPPI
QQFGEIAALS ILYSFVLSVF ILPTFLYMWA SWREKRNKL
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