Gene Aboo_0012 details

Gene Information

• Locus tag: Aboo_0012
• ID: 8826946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aciduliprofundum boonei T469
• Kingdom: Archaea
• Replicon accession: NC_013926
• Strand: +
• Start bp: 18387
• End bp: 19109
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 35%
• Product: hypothetical protein
• Protein accession: YP_003482386
• Protein GI: 289595690

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.615096
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGATA TACCATTTTA CATTGCTACC ATTGTTGGAT TCGTTCCATC ATTCGCTCTC 
TTGTACATTT ATTGGGGAAA GTTAGAAGGT TTATTCCATG AGAAAAAAAT GTTTTGGAAC 
TACTTTATAG GATGGATAAT GGGGGTCATA ATCGCTATAT TTTTCCTCAT CTCTAAATAT 
TCTGTTGGAG GTTATTTAGA TCTTTCCATA ATATTCGTAA TATTTTTCGC CCTATTCACC 
GAGAGTTTCA AATTTATATA CTTGAATTTT CCAAAAAAAA GAGGGAACTA TGAACTTCCG 
TATTTCGGTT TTGCCCTGGG TCTAGGAATA AGTGCGATAT GGGCTGTGGC TATCGTGTAT 
CAATATTTAA AATACGAGCA ACTAAACGAG ATAAATTATG TCATCGCCAT TGTGTCCCTA 
TTTCTATTCT CAATGGGGCT ATCAGCCATT CACGCATCGA CAGGTGCCAT TATAGGGTAT 
GGGATATACA AAGGTGAAAA AGAGAGATTT TTGCTCAAAG CTTTTGCCCT CCAAATTATA 
TTCAATTTCA CATTACTGCC TTTAATATGG AACCTATATC CTCTTTATTA TTTCTTCGGC 
ATATTCATAG GCATGCCTTA TCTTTACTCT AAAGTTTATA AAGGAGTGTT GATTAATGTA 
ATACCAAAGG AGGTTAAAAG AAAATGGCTA AAGGAAAGGA GAGAAAGAGG GGAAAGATTG 
TAG 

 

Protein sequence

MADIPFYIAT IVGFVPSFAL LYIYWGKLEG LFHEKKMFWN YFIGWIMGVI IAIFFLISKY 
SVGGYLDLSI IFVIFFALFT ESFKFIYLNF PKKRGNYELP YFGFALGLGI SAIWAVAIVY 
QYLKYEQLNE INYVIAIVSL FLFSMGLSAI HASTGAIIGY GIYKGEKERF LLKAFALQII 
FNFTLLPLIW NLYPLYYFFG IFIGMPYLYS KVYKGVLINV IPKEVKRKWL KERRERGERL