Gene Aboo_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0009 
Symbol 
ID8826942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp7923 
End bp9566 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content37% 
IMG OID 
Producttype II secretion system protein E 
Protein accessionYP_003482383 
Protein GI289595687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATAT CAAAAAAGGA GATTCCAACA AAACTAAAAA TCGTGAATAT GATGAGACCT 
ATAATAAAAA GTGAAAAATT AAAGGTTAAA ACTCCCAAAA AACATACAGC TCATGGCAGC
AACATCACTC CATTACCCGA AATAAAATCT CCAAGTATAA AGGAGATTGA GGTTGATCCA
ATAGAGGAGC CATACTCTTA TGTTAGAATA CTATTTGATG AGGTAACAAG TGAATACATC
TATGAGGTGA TTGAACCACC CATCACCGAT GATGAGAAAA AGATTCTTGA AAATATAAAA
TCCAAATTAA TTGAAGTGCT TGAATTAAAA GATTTTGAAA ATGATGAGGA AAGAAAAGAG
TATCTTATGG AAAAAACTGA GGAAATAATA GAAGAAATGA ATACCCCTGT TGACTCCGTG
GTTCTTGATA GGCTAAAATA CTATGTTTAT AGGGATTTCC TTGGATATGG ACTGGTCCAA
GTCCCAATGC ATGATAGTGA AGTGGAAGAC ATATCCTGTG ATGGTGTGAA TATACCAATT
TATATCTATC ACAGAATGTA CGGCTCTATC AGATCAAATC TGAAATTTCA AAAAGAGGAT
GAATTGGACA ATTATGTGAT ATGGATAGTC CAAAAATCAG GAAGACATAT ATCCATATCA
AACCCGATGG TAGATGCCTC TCTACCAGAT GGCTCCAGGT TGCAGGCAAC CTTAGGAAAG
CATGTCACAA AGAGAGGCTC CTCTTTTACA ATAAGAAGAT TCAAACCAAA TCCATTCACT
CCCATTGACC TCATAAGATT TAAAACGATG AGTAGGGAAA TGATGGCCTA CATATGGCTT
GCAGTAGAGA ACGGGATGAG TATAATTGTA TGTGGAGGCA CAGCCAGCGG AAAAACCACC
ACCCTAAATG CCATTCTTCT TTTCATTCCT CCCAATATGA AAATAGCAAG TATAGAAGAT
ACAAGAGAGT TAAATTTACC TCATGAAAAC TGGATTCCAT CACTAACTAG AGAGGGGTTG
GGAGAACCTA ATCCGGTAAC GGGTAAAAGA CCCGGAGAGA TAGATATGTT CGATTTGCTC
AAAGCCGCAC TTAGGCAGAG ACCCCAATAC ATAATGGTAG GAGAGGTTAG GGGTCCAGAA
GCATACACAG TATTCCAAGC TATGGCAACA GGGAAGACAT GCTATACGAC ATTCCATGCT
GATGATGTTA AATCAATGGT TCATAGATTT GAGAACGCAC CCATAAATTT ACCCAGAGCT
TTGATAACTG CACTAGATAT CGTAATTCTA CAAGCTCAAG TGAAAGTAGG CACTGCAATG
ACCAGGAGAG TTAAATCAAT AACCGAAATA GTTGGACTAG ACCCAGAAAC AAACGAAATA
ATAACAAATA ATGCCTATAC ATGGAATCCT GCAGATGATA CCTTTAATTA CAGCGGACAT
AGTTATATTT ACGAGAAAAT CTCTGCCATA AAAGGGTGGA GTCAGAGGAG AATGGAGTTG
GAAGTTAAGA GAAGAGAGAG AATTTTAGAG TATATGGAAA AACTTGGAGT TAGATATTAC
AGAGATGTTG CAAGGATTGT AGCTGCATAT TACAAAAAAC CAGAAGAAGT ATTAAAAAGA
GTAGAAGAAG TATTATCCAG CTAA
 
Protein sequence
MAISKKEIPT KLKIVNMMRP IIKSEKLKVK TPKKHTAHGS NITPLPEIKS PSIKEIEVDP 
IEEPYSYVRI LFDEVTSEYI YEVIEPPITD DEKKILENIK SKLIEVLELK DFENDEERKE
YLMEKTEEII EEMNTPVDSV VLDRLKYYVY RDFLGYGLVQ VPMHDSEVED ISCDGVNIPI
YIYHRMYGSI RSNLKFQKED ELDNYVIWIV QKSGRHISIS NPMVDASLPD GSRLQATLGK
HVTKRGSSFT IRRFKPNPFT PIDLIRFKTM SREMMAYIWL AVENGMSIIV CGGTASGKTT
TLNAILLFIP PNMKIASIED TRELNLPHEN WIPSLTREGL GEPNPVTGKR PGEIDMFDLL
KAALRQRPQY IMVGEVRGPE AYTVFQAMAT GKTCYTTFHA DDVKSMVHRF ENAPINLPRA
LITALDIVIL QAQVKVGTAM TRRVKSITEI VGLDPETNEI ITNNAYTWNP ADDTFNYSGH
SYIYEKISAI KGWSQRRMEL EVKRRERILE YMEKLGVRYY RDVARIVAAY YKKPEEVLKR
VEEVLSS