Gene Aboo_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0008 
Symbol 
ID8826941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp7040 
End bp7912 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content39% 
IMG OID 
ProductType II secretion system F domain protein 
Protein accessionYP_003482382 
Protein GI289595686 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGG AAAAACTTAT ATTTTATGTG TCTGCATTTA TAGCTGCAAT ATTCATAAGT 
ATTGGAATAA TGCTCTACCT CAAAAAAACT AATATTTTTG GCCTAATCCC CCTTGATTTT
ATAGTTATAG GTACATCTGC ATTCTTATTT GGACCTGGAA TATACGATAT GCTCCATACA
AGGAAAATAA AGAAGATGGA AGAGAGATTT CCGGATTTCC TCAGGGATGT GGCAGAATCC
TCAAGATTTG GTATGACCCT TGCAGACTCC ATCGTAGTGG CTTCTTCTGG CAAATATGGG
GCCCTTACAG ACGAGATAAA GAGAATGGCT TCAAAGATAA GTTGGGGAGT TCCAGTTAAG
GACGCACTGC TATCATTTAA CGAAAGGGTT AAAACTCCAC TGATAGACAG AATAACGGCA
ATAATAATAA AATCAAACGA AGCCGGAGGT AATATTGCAG ATGTTCTCTC AATGGTTGCA
AGAAATGCAA GGGAATCTCA ATTAGCTGCT AAAGAGAGAA ACATAGAGAT GTTTACCTAT
GGTTTTGTTC TCCTAACTTC ATTCTTTGTT TTCTTAGCAA CTATTATAAT TCTAAACAAC
TCATTTCTAC CAGAGATGGG CAAAGCAGGT ATGGCTGTAG AGGAGAGCTT TAAAAAGGCA
TCCGTTGCCG GTGCTTTACC CGGAGGGGGT ATAGCATACG AATATGTCCC AATAATAACC
CTGTTATTTG TAATAGCGAC CATAATCCAT GGGGTTGGAG ATGGAATAAT GATAGGCATA
CTCTCAGATG GAAGAGTAAA AAGTGGCTTC GTATGGGCCT TTGTTCTTCT TGCCTCGGGA
TACTTCATTC TAAGGCTATT GGGGGCCGTA TGA
 
Protein sequence
MNKEKLIFYV SAFIAAIFIS IGIMLYLKKT NIFGLIPLDF IVIGTSAFLF GPGIYDMLHT 
RKIKKMEERF PDFLRDVAES SRFGMTLADS IVVASSGKYG ALTDEIKRMA SKISWGVPVK
DALLSFNERV KTPLIDRITA IIIKSNEAGG NIADVLSMVA RNARESQLAA KERNIEMFTY
GFVLLTSFFV FLATIIILNN SFLPEMGKAG MAVEESFKKA SVAGALPGGG IAYEYVPIIT
LLFVIATIIH GVGDGIMIGI LSDGRVKSGF VWAFVLLASG YFILRLLGAV