| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aboo_0006 |
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| Symbol | |
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| ID | 8826939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aciduliprofundum boonei T469 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013926 |
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| Strand | + |
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| Start bp | 4411 |
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| End bp | 6048 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003482380 |
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| Protein GI | 289595684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCCA AAGGAATAAA GAAATTGAAT TTCTCAATAT TTCAAGGCAT CGTAAAACCC
CAAGTTAAAA TAAAAATCCC AAAATTCGAA GTCGGGAGAA GCAGTGATAT CACTCCAATT
CCCCCACTTG AAAAGGAAAA TTACGAAACT GTTGAAGTTT ATCCAGTTTA TCCCCCTTAT
GTTTACACTC GAATAATATA TGATAGGGAG GAGTATGAGT ATATTTATGA TTTAATAGAG
CCACCTCTCA CAGATGAAGA GCAGAGATTA CTCGATGAGA TAAATGATAC CCTTGATAGA
ACTCTAAAAT ATGAATGGGA GATTATGACC AACAAAGACA GAGAGCAATA TTTAAGGGAG
AGTGTAGACA GTTTCTTAAG GAGTAGAGAT ATAAAGATAG ATAAAATATC AAAGGAGAGA
ATACTCTATT ATGTTGTTAG GGACCATGTG GGTTATCAGA AAATCGAGGG ATTAATTAGG
GATGAATACA TAGAGGACAT ATCATGCGAT GGTGTTGGCG TTCCCATTTA TGTCTTTCAT
AAAAAATATC AGTCCATTAA AACTAAATTG GTATACAAGG ATGATGATGA GCTTAACTCT
TTCATAGTGT ATATCTCCCA GAAATGTGGA AAGCAGATAT CTGTAGCAGA GCCCATATTG
GATGGAACAA CTGCCGAGGG GCATAGAGTA CAAGCCACCT ATGGAAGAGA AGTCACTACT
AGAGGGGGAA CTTTTACTAT CAGAAGATTC AAAGAGAAGC CATTTACTCC CACAGAGTTA
GTTTTATTTG GCACTGCATC CCCAGAGATT GTTGCATATC TTTGGTTGAT GGTTGAGCAT
GGGGAGAGTG CCATAGTCAT CGGAGGTCCA GCTTGTGGAA AAACCTCCAC GCTTAATGCA
TTCTCTATGT TCATACCTCC AACCGCGAAG ATTGTTAGTA TAGAAGATAC AAGAGAAATA
AACCTTCCAC ATCAAAACTG GATTCCAGGT ACAACCAGGA GTGGTATAGG TGAGGCATCC
ATAACAGGTA AATCTGCAGG AGAAATTGAT ATGTACGATT TAGTTAGGGC TGCATTGAGG
CAGAGACCTA ACTACATAAT TGTGGGAGAG GTTAGAGGTA AAGAAACATA TACAATGTTT
CAAGCAATGG CCACAGGACA TACCACATAC TCAACGATGC ATGCAGATTC TATTGTTTCT
ATGATTCATA GACTTGAAAA TCCACCAATA AACTGCCCGA GAATTCTTAT GACCGCATTA
AACAATGTCA TTATTCAGAA AATAGTGAGA ACGAAGGAAG GAATCACTAG GAGGATTACA
CAGCTCGTGG AGAATGTTGG GTTTGAGCCA GAAACAAATG AGTTAATAAC AAATGTGGTT
TTTGAATGGG ATCAGGCCAG GGATACGCAC AAATTCAAAG GGCATAGTTA TCTATTTGAC
AAGATAATGA CTATGAAGAA CATGACCCAT AACGAAATGA TGGAGGAATT TGAAAGAAGA
GTTGATATAG TAAAATATTG GGTTAAAAAA GAGATTTTAG ATTTCAGAGA TATCTGGAAA
ACAATAGCCA ATTATTACAA GGATCCAATA GGAACTGCAG AAGAAGCACG TCTCAAACTT
GGGGAGGTGA AAAGTTGA
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| Protein sequence | MMPKGIKKLN FSIFQGIVKP QVKIKIPKFE VGRSSDITPI PPLEKENYET VEVYPVYPPY
VYTRIIYDRE EYEYIYDLIE PPLTDEEQRL LDEINDTLDR TLKYEWEIMT NKDREQYLRE
SVDSFLRSRD IKIDKISKER ILYYVVRDHV GYQKIEGLIR DEYIEDISCD GVGVPIYVFH
KKYQSIKTKL VYKDDDELNS FIVYISQKCG KQISVAEPIL DGTTAEGHRV QATYGREVTT
RGGTFTIRRF KEKPFTPTEL VLFGTASPEI VAYLWLMVEH GESAIVIGGP ACGKTSTLNA
FSMFIPPTAK IVSIEDTREI NLPHQNWIPG TTRSGIGEAS ITGKSAGEID MYDLVRAALR
QRPNYIIVGE VRGKETYTMF QAMATGHTTY STMHADSIVS MIHRLENPPI NCPRILMTAL
NNVIIQKIVR TKEGITRRIT QLVENVGFEP ETNELITNVV FEWDQARDTH KFKGHSYLFD
KIMTMKNMTH NEMMEEFERR VDIVKYWVKK EILDFRDIWK TIANYYKDPI GTAEEARLKL
GEVKS
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