Gene Aboo_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAboo_0004 
Symbol 
ID8826937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAciduliprofundum boonei T469 
KingdomArchaea 
Replicon accessionNC_013926 
Strand
Start bp2602 
End bp3474 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content36% 
IMG OID 
Productagmatinase 
Protein accessionYP_003482378 
Protein GI289595682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTCTGC ATTTTGCAGA TGCGAATAAG AATTTTAACG AATCTTTTTT CATAATTTTT 
GGCGTTCCGT TTGATGGAAC ATCCTCTTAT AGGCATGGTT CAAAATTTGC ACCTGACGAG
ATAAGAAAAG CATCATATAA CCTTGAAAGT TATGTTATGG AGCATAAAAT TTCTCTCTCA
GAACTCCCAA TTCATGATAT GGGCGATATT GGAACCCTTG ATGAATTTGG AAATGTAGAG
GATGTAATCG ATACAGTTTA TTCCACAATG CAATCCATAC TACCCAATAA ATTTCCAATA
ATGATTGGTG GGGAGCATTC AATAACCATC GGTGCTGCAA AGGCTCTAAA AAAATTAAAT
GCAGGTATAA TATTCATAGA CGCCCATGGA GATTTTAGAG ATGAATATTT AGGAAATAAG
TACAGCCACG CTTGCACTGC CAGAAGGGCA TATGATATCT TAAATGGCAA AATAATTTCA
ATAGGAGTGA GATCAGCATC TCAAGAAGAA GTTGAAGATG CAAAGGATTT GAATTACGAA
TGGATTGATT CATATGAATT TCAAAGATTG GGATGGAAAA GAACAATAAA AAAAGCCATG
GAAATATTGG ATGTCCAGAA AGTATATTTA TCTATCGATA TAGATGGTAT TGACCCAGCC
TATGCTCCCG GAACAGGCAC TCCTGAGTTC TTTGGATTAA GCCCTATGGA TGTAAAAAAC
ATCATAAATT TTCTCGCTCC CAATTTAATA GGTGCCGATA TAACAGAAGT GTGTCCACCA
TATGATAATG GAAATACATC CATATTGGCT GCACGCTTGG TTCAAGAAAT TATAGCGGCA
AAGTGGAATA CTATGGAAGA TAAGTTTAAA TAA
 
Protein sequence
MLLHFADANK NFNESFFIIF GVPFDGTSSY RHGSKFAPDE IRKASYNLES YVMEHKISLS 
ELPIHDMGDI GTLDEFGNVE DVIDTVYSTM QSILPNKFPI MIGGEHSITI GAAKALKKLN
AGIIFIDAHG DFRDEYLGNK YSHACTARRA YDILNGKIIS IGVRSASQEE VEDAKDLNYE
WIDSYEFQRL GWKRTIKKAM EILDVQKVYL SIDIDGIDPA YAPGTGTPEF FGLSPMDVKN
IINFLAPNLI GADITEVCPP YDNGNTSILA ARLVQEIIAA KWNTMEDKFK