Gene Nmag_4165 details

Gene Information

• Locus tag: Nmag_4165
• ID: 8828899
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013924
• Strand: -
• Start bp: 210769
• End bp: 211437
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 52%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003482241
• Protein GI: 289937639

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.55961
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGA TCCGTGTACA ACTGACGCTT GACCCAAACG ACCTCCCCCC GTTTTATTCA 
ATCGTGTCTG ACTCACCGGA CATCAGCGAA CTACAGCTCG TCGACTGGAA CTTAGCTGCC 
GACGATATTG GAACGATTAT TTATGTTGTC GATGGTGACG AAGAACGGTT TCGCGACGCA 
CTCGACGGGG CGAACGGCAT CGTCACTACT GATGTTACCA AATCCAGCCA AGGTTGGTCG 
TACGCCGTTG TCAAGGCGAA AGTGCATGCG ATTCCGCTAT TCGACACGTT AATGGAACTC 
GTAGGCAGAG CAGGAATGAT TGTTCGAAAG CCGATCGTCA TTGATGATAA CTGTTCGCAC 
GCACGGATCG TCGGCGAACC GGAATCACTT CAGTCGATCA TCAATGATGT TCCATCGAAT 
TTTGAGTTGC GTGTTGACCG AATCGAGTCG TTCCCCGGCG AGGTGGATGC TCCTGAACAA 
CTGTTGAGCG ATCGGCAGCA AGAAGTCGTG TCGTTGGCAC TCGAAATGGG ATACTATGAT 
CAGCCACGTG GGACGACACA CGCCGAAATC GCGGCAAAGG TCGGGTGTGC GCCAAACACC 
GTAACAATGC ACCTACAGAA AGCTGAGGCA AAACTGATTC CCGCAACCAT GAATCACCCC 
GGGGCCTGA 

 

Protein sequence

MKQIRVQLTL DPNDLPPFYS IVSDSPDISE LQLVDWNLAA DDIGTIIYVV DGDEERFRDA 
LDGANGIVTT DVTKSSQGWS YAVVKAKVHA IPLFDTLMEL VGRAGMIVRK PIVIDDNCSH 
ARIVGEPESL QSIINDVPSN FELRVDRIES FPGEVDAPEQ LLSDRQQEVV SLALEMGYYD 
QPRGTTHAEI AAKVGCAPNT VTMHLQKAEA KLIPATMNHP GA