Gene Nmag_4109 details

Gene Information

• Locus tag: Nmag_4109
• ID: 8828843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013924
• Strand: -
• Start bp: 153720
• End bp: 154451
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 61%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003482191
• Protein GI: 289937589

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGT ACGAAGTCTC GTTCAAACTC CGCCACGAGT GTCCCTATCG GGGGCTCTCC 
GAGCAGTTTC CCGGGGTTTC GATCCGGGAG TGGTATCTCC AGGATTGTCA GGTCCTCGAG 
ATCACCGCTT CGGACGCCAG CGACGACGAG TTGCTCAAGC AAATCGACGC GCTCGGAACG 
GTCTTGCACA CCACGGCCGA CGGCTCAGAC CTGCATGTGA TCGTCCAGTC GTGTGCCTGT 
CCCATCGAGG AGTCGATCAT CCGTCGGTTC GAGCGTCACA ACTGTGTGCA CCTGCCGCCG 
ACGGTGTACC GCAACGGCTG GGAGCACTAT TCGGTGATTG GCTTCGACGA GGCCGACGTA 
ACGGCGTTGC TCGCCGAACT CGACGCGGAC CGTGAGATCG ACGTCCTCTC GAAGACCTCG 
ATCGAGGAAC GACACGTCCC TCACAGTTCG CTGTTCTCGG TCGATCGACT GTTCGACGGC 
CTCACCGAGC GCCAACTCGA GGCCTTACGG ATCGCGCTGG ACGCAGGCTA CTACAACCAA 
CCACGGGGCG CATCGATCAC AGAGCTCGCC GAGGAGACGA CTGTTGCGCG GGCGACTTTC 
GAGGAACACC TGCGGAAGGC TGAGAACAAA CTCGTCACGA ACGCCGGGCA GTTCGTCCGA 
CTGCTGACCG AGGCCCAGGG CGACGTGTTG CGTTCGGGAG CACGGAGCGT AAAACCGGTC 
GGAGACGACT GA 

 

Protein sequence

MSMYEVSFKL RHECPYRGLS EQFPGVSIRE WYLQDCQVLE ITASDASDDE LLKQIDALGT 
VLHTTADGSD LHVIVQSCAC PIEESIIRRF ERHNCVHLPP TVYRNGWEHY SVIGFDEADV 
TALLAELDAD REIDVLSKTS IEERHVPHSS LFSVDRLFDG LTERQLEALR IALDAGYYNQ 
PRGASITELA EETTVARATF EEHLRKAENK LVTNAGQFVR LLTEAQGDVL RSGARSVKPV 
GDD