Gene Nmag_4053 details

Gene Information

• Locus tag: Nmag_4053
• ID: 8828787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013924
• Strand: +
• Start bp: 96186
• End bp: 96908
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 60%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003482143
• Protein GI: 289937541

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATGC AGCAGTCAGT CTCGTGTCTA CGGCTGACTC TCGACCTTTG GCATCCCGGC 
TGTTGGGCGA TCGATGCAAC CGGACGCGCT GACGGCGGAA TCCTCGCTCA TACGGTGTAC 
ACGTCACCGC ACGGACGAGG GTCCCACTCG AGTACGGCTA ACGGGCTGTT CACCGCGTTC 
GGCGACACAT CACAACAGAT ACAGGACGTC CTCGATGCGG TTCGAGACTC GAGCCAGACG 
GTGCAGGTCC ACGAGCTCCA AGAGCAGTTC GGGCACGAAC GAGATGTGCC GGCAAACATC 
GCACGGGAAT TCTTTCTCGA GTACGATCCC GGCGAGATGG TCTGTCCGGT CTTGCTGGAA 
AACGGGTTCG TCCACCGCAC CCCTATCAGA ATTCAAGATG GGATCGAAGA ATGGAACCTC 
TGCTTTATCG GGGATCGGTC GAGGGTCACA GACGCGCTCG ACGATGTTCG TAAGCAGGCT 
GACGCGGAGG TGACCGTCAC GTCTATCACG ACGGCTGAGG CGGCCGATCA TACGTCGCGC 
AGCCAGCGAC TCGACACGCT CACACCGGCC CAGCGGAAGG TGTTCGAACA CGCTCGTAAC 
GCCGGTTACT ACGAGTGGCC GCGAAAGACG ACGACACGAG AACTGGCCGA CGATCTCGAT 
ATCGCCAAAT CGACGCTCCT CGAACACCTT CGAGTCGCCG AATCCAAGCT TCTCGATCCC 
TGA 

 

Protein sequence

MSMQQSVSCL RLTLDLWHPG CWAIDATGRA DGGILAHTVY TSPHGRGSHS STANGLFTAF 
GDTSQQIQDV LDAVRDSSQT VQVHELQEQF GHERDVPANI AREFFLEYDP GEMVCPVLLE 
NGFVHRTPIR IQDGIEEWNL CFIGDRSRVT DALDDVRKQA DAEVTVTSIT TAEAADHTSR 
SQRLDTLTPA QRKVFEHARN AGYYEWPRKT TTRELADDLD IAKSTLLEHL RVAESKLLDP