Gene Nmag_4025 details

Gene Information

• Locus tag: Nmag_4025
• ID: 8828759
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013924
• Strand: +
• Start bp: 67098
• End bp: 69089
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 54%
• Product: TRAP transporter, 4TM/12TM fusion protein
• Protein accession: YP_003482117
• Protein GI: 289937515

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA AACCATCTCA GTTAGCGCTG ACACTCACTG CGATTGCCTT GTGGGCCTGG 
GTAATTGCGT ATGCTCTCTG GTCCTGGCTT CCCCGTGCGC AGTACACTAT CACCTTTATT 
GGACTCGCTA TATTCATCTA TCTGTTAGAC GAATACATTG GGCTCGGTGA CAGTGACGGT 
GGTGGTGATA CCGATGCCAG CGGCAACCGT CGGACACTCC ATGGTCTCTT CTTGGCAGCG 
ATTGGGGCTG TTACAGCCAT TGCCACCGTG TACCTTTACG CGAATTACAA TACTCTCGTC 
ACCACAAGGG TCGGCTATGC GCTTGACCAC GAACTGCTGC TGGCAGCAGT CTTTGCTGCT 
GCAGTCATCT ACCTGACCTA TAGAGCGTTC GGTCTCGCAT TTGTTGGAGT GATTCTGTTT 
GCGATTGGGT ACGGGTACTT CGGGCCATAC TTCCCAGGAG TACTTACCCA CTCCGGGTTT 
TCAGAGACCC GGATTCTCAA TATCATGGTG CTCGAGATTG ACGGATTCTA CGGTGAACTC 
TCCGAGATCG TCGCTGCGTG GGTCGCGCCG TTCCTGCTGT ACGCAGGACT GTTAAAGGCC 
TACGGGGCGT TTGACCTGAT CATCCGTGTT GCGTTCAGAA GTGCGACCGT CCTCCGATCT 
GGCGTCGCTC AGTCCGCTGT CATCGCGAGC CTCGTGATTG GTTCGATCAA CGGGTCACAG 
ACGGCTAATG CGGCGATGAC TGGATCGTTC ACAATTCCAC TGATGAAAAA CAGTGGAATG 
AAATCCGAAA CAGCCGGCGG CATTGAATCC GTTGCGTCAA CAGGTGGCCA GATCATGCCC 
CCTGTCATGG GTGCAGCAGC GTTCGTGATG GCGTCGTTGC TCGGTATTAC GTACATCGAG 
GTCGTTATTG CAGGCCTCAT TCCGGCAGCG ATTTTCTTCT TCTCAGTCGC CGCTGGTGTC 
CACTACACCT GGATCTCTCA GAGTGGAAAT GCAGAACTCA ACGTCTCTGA CCACATTGAT 
GAGGTAAAAT CGAAGCAACA ACTCGCAGTT GAAGGTGTCA TGTATGCTGT TCCACTGATT 
ATCCTGATCT ATCTCCTTGG CGTCCTGCAG TGGACCGTGA TGACATCGGC ACTCTACACT 
GTTATCTCGA TGATCGTACT TGGTGTTACC GTTCCTGTCA TCCGAGCGAC CCAACTTCAG 
GACGAATCGC CAGTCGCGAT GCTCCGGACG AAACTCTTCG AGACGGTTGA CGGGTTCCGC 
GAGGGGGCAA TCATCCTTGC ACCAATCGTG ATCATCATTG CCGCAGTCAA CGGTATTGTT 
GACGTACTTG TCTCGACCGG TATTCCGGGG ATTCTTTCGC TTATCCTCAT CGACCTTTCG 
GGCGGCAGCA TGTTCCTGGC AGTGCTCATC GCGATGGTCG TCTGTATCCT CCTCGGTCTG 
GGAATGCCGA CAGTTGCTGC GTACTCGCTG GTTGCATTGC TCATCGCACC GGCGCTGGTC 
AGTGACTTCG CCGTACCGGA TCTCGCAGCC CACTACTTCG TGCTGTATGC AGCGATCCTT 
TCGGGTATTA CCCCACCGAT CGCAATTGCA GTCGTGGTGG CTGCTGGCGT CGCTAAAGCT 
AACTTCTGGC GTACGTCACT CGAGGCGCTG AAACTGGCAG CACCGCTGTA CGTTCTCCCG 
TTTGCCTTCA TCTACAATCC TGAAATTGTC GTTGGCGGAA TATCCGAGAT GACGCTCGTC 
TCTGGTGGAC TGGCACTGCT CGGCGCAATC AGTATCATCC ACGGCTTGAA CTACTACAGA 
CCGATCTTCG GTATGAGTGG TATGGTGAAT ATCGGTATCC GAGGTGTGTA TGTCCTCCTC 
GGAGTCGTCA TAATGGTCGT CCCATCGCTC TGGGTTCGAC TTGGTGCACT CGGCGTGGCT 
GCCTTCCTCT ACACGGTCCA GTGGCGCGGT TCATTTGAGG CAGGCAGTCC AGCCGTCGCC 
CAGGGCGACT AA 

 

Protein sequence

MKLKPSQLAL TLTAIALWAW VIAYALWSWL PRAQYTITFI GLAIFIYLLD EYIGLGDSDG 
GGDTDASGNR RTLHGLFLAA IGAVTAIATV YLYANYNTLV TTRVGYALDH ELLLAAVFAA 
AVIYLTYRAF GLAFVGVILF AIGYGYFGPY FPGVLTHSGF SETRILNIMV LEIDGFYGEL 
SEIVAAWVAP FLLYAGLLKA YGAFDLIIRV AFRSATVLRS GVAQSAVIAS LVIGSINGSQ 
TANAAMTGSF TIPLMKNSGM KSETAGGIES VASTGGQIMP PVMGAAAFVM ASLLGITYIE 
VVIAGLIPAA IFFFSVAAGV HYTWISQSGN AELNVSDHID EVKSKQQLAV EGVMYAVPLI 
ILIYLLGVLQ WTVMTSALYT VISMIVLGVT VPVIRATQLQ DESPVAMLRT KLFETVDGFR 
EGAIILAPIV IIIAAVNGIV DVLVSTGIPG ILSLILIDLS GGSMFLAVLI AMVVCILLGL 
GMPTVAAYSL VALLIAPALV SDFAVPDLAA HYFVLYAAIL SGITPPIAIA VVVAAGVAKA 
NFWRTSLEAL KLAAPLYVLP FAFIYNPEIV VGGISEMTLV SGGLALLGAI SIIHGLNYYR 
PIFGMSGMVN IGIRGVYVLL GVVIMVVPSL WVRLGALGVA AFLYTVQWRG SFEAGSPAVA 
QGD