Gene Nmag_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_4001 
Symbol 
ID8828735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013924 
Strand
Start bp44664 
End bp45950 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content49% 
IMG OID 
Productamidase, hydantoinase/carbamoylase family 
Protein accessionYP_003482096 
Protein GI289937494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00670775 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAA ATATTATCAA ATGCGGGAAC GTGAGTATAA GTCTCAAACC CATGGTCCAA 
GCAATTGATC GCGATCGCAT TGAACGCCGT CTTGACGACC TCTGGGAAAT TGGGCAAACA
CAAAAAGGAG GTGTCACTCG TCTAGCGTAT ACAGACGAAG AGTCAGACGC GTTCTCCTAT
ATTCAGGCTG AACTCTCCAG TAGCTATTCA ATCACAGAAG ACTCGATGGG GAATCTCTTC
GCAACTCGAG AGCCGGAGGC GTCAGACTCG ATCTATATCG GAAGTCATCT TGATTCTGTA
TACAATGGCG GCCGTCTCGA TGGGACCCTG GGTGTGGTTA CTGCAATCGA AGCAATTGAA
GCAGTATATA ATTCCAAGTG TGAACCAGCG CACCCACCAA CTCTCGCAAT TTTTCGGAAC
GAGGAGTCCG CTCGGTTTGG GCAACATACA GTCGGAAGCC GAGGTGCACT CGGTCAACTC
GAAGTGGAAG ATTTCTCAGC TACTGATCAA AATGATGTCC CACTATGGCA TGCAATGCAA
TCGCAAGGGT TTGAGCCCGA AAATCTCTCT CATCCAACGA TCAATACCGA ACGAATTGCG
GGATTCCTTG AACTCCACAT TGAACAGGGC CGGGTGCTTG ACGAACGGGA GTTAGATGTT
GGTCTTGTCA CTAGTATTCG TGCGCCTGTG AGATGTCGTG TCACCGTAAC TGGGGACCAC
GATCACTCTG GTGCAACTCC GATGGAGCTA CGGTGTGACG CACTGAGCGG TGCTGCCGAG
ATGATAACAG CAATCGAATC TGTTGCGACA ACTGCCGCTA CTGATGGAGA TCTGGTTGCC
ACTGTTGGAG ATATCACGCC AGTCAACGGT GCAATAAACA AGGTCTGTGG AGAGGTTTCT
TTCCCGATTG ATATTCGGAG CAAAGAGGAG GACTATCGCG ATACGATTGA GAATCGCATT
GTAGATACAA TCGAAACAAT TGCAGATGAC CGCGAGCTAA GAACCGAGAT CGAACATCTC
GATCGATCTG AACCGGTTCA GCTCGACTCA AAATTCGTTA CTGTTCTCGA GCAAAGTGCC
GAAACGAGTG GCGCTGCGTA TTGTTGTCTC CCGAGTGGCG GCGGACACGA TGCTATGAAT
TTCCAATTAG CTGGGATTCC AACAGGGATG GTTTTCGTTC CAAGTATCAA CGGTATCAGC
CACAATCCAG CTGAAGCAAC AAAACCAGAG GCAATCGAAA AAGCAACCCG TATACTCTCG
AATGCGTTAG TGAATTTTGA GGAGTGA
 
Protein sequence
MGENIIKCGN VSISLKPMVQ AIDRDRIERR LDDLWEIGQT QKGGVTRLAY TDEESDAFSY 
IQAELSSSYS ITEDSMGNLF ATREPEASDS IYIGSHLDSV YNGGRLDGTL GVVTAIEAIE
AVYNSKCEPA HPPTLAIFRN EESARFGQHT VGSRGALGQL EVEDFSATDQ NDVPLWHAMQ
SQGFEPENLS HPTINTERIA GFLELHIEQG RVLDERELDV GLVTSIRAPV RCRVTVTGDH
DHSGATPMEL RCDALSGAAE MITAIESVAT TAATDGDLVA TVGDITPVNG AINKVCGEVS
FPIDIRSKEE DYRDTIENRI VDTIETIADD RELRTEIEHL DRSEPVQLDS KFVTVLEQSA
ETSGAAYCCL PSGGGHDAMN FQLAGIPTGM VFVPSINGIS HNPAEATKPE AIEKATRILS
NALVNFEE