Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_4001 |
Symbol | |
ID | 8828735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013924 |
Strand | - |
Start bp | 44664 |
End bp | 45950 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | amidase, hydantoinase/carbamoylase family |
Protein accession | YP_003482096 |
Protein GI | 289937494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00670775 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAA ATATTATCAA ATGCGGGAAC GTGAGTATAA GTCTCAAACC CATGGTCCAA GCAATTGATC GCGATCGCAT TGAACGCCGT CTTGACGACC TCTGGGAAAT TGGGCAAACA CAAAAAGGAG GTGTCACTCG TCTAGCGTAT ACAGACGAAG AGTCAGACGC GTTCTCCTAT ATTCAGGCTG AACTCTCCAG TAGCTATTCA ATCACAGAAG ACTCGATGGG GAATCTCTTC GCAACTCGAG AGCCGGAGGC GTCAGACTCG ATCTATATCG GAAGTCATCT TGATTCTGTA TACAATGGCG GCCGTCTCGA TGGGACCCTG GGTGTGGTTA CTGCAATCGA AGCAATTGAA GCAGTATATA ATTCCAAGTG TGAACCAGCG CACCCACCAA CTCTCGCAAT TTTTCGGAAC GAGGAGTCCG CTCGGTTTGG GCAACATACA GTCGGAAGCC GAGGTGCACT CGGTCAACTC GAAGTGGAAG ATTTCTCAGC TACTGATCAA AATGATGTCC CACTATGGCA TGCAATGCAA TCGCAAGGGT TTGAGCCCGA AAATCTCTCT CATCCAACGA TCAATACCGA ACGAATTGCG GGATTCCTTG AACTCCACAT TGAACAGGGC CGGGTGCTTG ACGAACGGGA GTTAGATGTT GGTCTTGTCA CTAGTATTCG TGCGCCTGTG AGATGTCGTG TCACCGTAAC TGGGGACCAC GATCACTCTG GTGCAACTCC GATGGAGCTA CGGTGTGACG CACTGAGCGG TGCTGCCGAG ATGATAACAG CAATCGAATC TGTTGCGACA ACTGCCGCTA CTGATGGAGA TCTGGTTGCC ACTGTTGGAG ATATCACGCC AGTCAACGGT GCAATAAACA AGGTCTGTGG AGAGGTTTCT TTCCCGATTG ATATTCGGAG CAAAGAGGAG GACTATCGCG ATACGATTGA GAATCGCATT GTAGATACAA TCGAAACAAT TGCAGATGAC CGCGAGCTAA GAACCGAGAT CGAACATCTC GATCGATCTG AACCGGTTCA GCTCGACTCA AAATTCGTTA CTGTTCTCGA GCAAAGTGCC GAAACGAGTG GCGCTGCGTA TTGTTGTCTC CCGAGTGGCG GCGGACACGA TGCTATGAAT TTCCAATTAG CTGGGATTCC AACAGGGATG GTTTTCGTTC CAAGTATCAA CGGTATCAGC CACAATCCAG CTGAAGCAAC AAAACCAGAG GCAATCGAAA AAGCAACCCG TATACTCTCG AATGCGTTAG TGAATTTTGA GGAGTGA
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Protein sequence | MGENIIKCGN VSISLKPMVQ AIDRDRIERR LDDLWEIGQT QKGGVTRLAY TDEESDAFSY IQAELSSSYS ITEDSMGNLF ATREPEASDS IYIGSHLDSV YNGGRLDGTL GVVTAIEAIE AVYNSKCEPA HPPTLAIFRN EESARFGQHT VGSRGALGQL EVEDFSATDQ NDVPLWHAMQ SQGFEPENLS HPTINTERIA GFLELHIEQG RVLDERELDV GLVTSIRAPV RCRVTVTGDH DHSGATPMEL RCDALSGAAE MITAIESVAT TAATDGDLVA TVGDITPVNG AINKVCGEVS FPIDIRSKEE DYRDTIENRI VDTIETIADD RELRTEIEHL DRSEPVQLDS KFVTVLEQSA ETSGAAYCCL PSGGGHDAMN FQLAGIPTGM VFVPSINGIS HNPAEATKPE AIEKATRILS NALVNFEE
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