Gene Nmag_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3980 
Symbol 
ID8828714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013924 
Strand
Start bp19834 
End bp21111 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content57% 
IMG OID 
Producttransposase, IS605 OrfB family 
Protein accessionYP_003482078 
Protein GI289937476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTCGT CCAAACTCAC CCAAACCTTA TCGTTCGGAC TAGACATCCA TGCGGGGAGT 
GGGGTCGACC TGCAAACGGG CTGTATTGAG GCCCGCCGCA TCCGCAACGA AGCCAATCGG
CTCGACCGAG TCGGTTGGGA TTGGGGCGAC ATTAAATCGA CTGTCGTTGA TAACGCCGAT
CACGTTAACA ACACCAGCCA ACTCATCGTT GACAAGGCAC TCGGTGAAAT CGAAACCTAT
CACGACAACA AAGATGACGG GTGGGGTCGA CCTTACCCAT ACATCGACGA GTCGTACCCG
ATGGTGATGA ACCACCGCGA AGGCTATCGC CTGTTCCCCG AAGACGACGG GACGGTTCGG
TTCCGTATCA CTGCCACAAG AGGCACGCAC GTCAAAGGCG AACTCCGTGG CAACCCCGAC
CACTTCGATA GACTCCAAAT CGCATTCAAC GACGAAGAAT GGCGGGTTGG AACCGCTGAA
GTCGTTCACA AACACAATGA GTGGCGACTC CACGTCACCG TCACCCACGA GACTCATCGC
GTCGCCAGCA AGAACGACGC GGACACAATT GTTGGTGTGG ATGTGAACGA GGACTGTATT
GCCCTTGCTG CAATGAGTCG GAACGGTGGG GTGAAGCAGT CGGTTGTGTT TGAGTATCCG
TCAGTGAAAG AACAGCGACA CGAGTTTTTC ACCAAGCGCA AGCGGATGCA GAAAGCCAAC
CAGACCGCGT TTGCATCCAC CGTGCAGACG GAGGAACGGG ACTACGTTCA CGATTGCCTG
CACAAAGTGT CGCGCCGAGT AGTTGACTGG GTCTCGCAGT TCACGAATCC GGTCATTGTC
TTTGAAGACC TCAAAGACAT GCGAGACTCC ATCGACTACG GAACGCGGAT GAACCGTCGC
CTCCACTCAC TCCCGTTCGC TGCACTCCAA GAGATGGTGT CGTACAAGGC TGCATGGGAG
GGGGTTCCGT CCGACGAGGT TGACCCCGAG TACACAAGCC AGCGGTGCCC AAGAACGGAG
TGCCAGCACA CAGAACGAGC GAACCGACAC AGAAAGCGGT TCAAGTGCCA GCAGTGCGAG
TTTCAAGACC ATTCCGATAG GAAGGCGGCG GTGTGCGTTG TGCAGAATTG GTTTGACGAG
CAGTCTGGAA ATGTGCCGCC TCTCGAAACC CTTCCACGAG TTCGGACGGT GAGACGGGCG
GCATCGGGCG GTGGTGGAGC CGCCGACTCT CACGGACGCC ATTCGCGTTC GGGTGTTACC
TCCGCAGAGG AGGCGTAA
 
Protein sequence
MQSSKLTQTL SFGLDIHAGS GVDLQTGCIE ARRIRNEANR LDRVGWDWGD IKSTVVDNAD 
HVNNTSQLIV DKALGEIETY HDNKDDGWGR PYPYIDESYP MVMNHREGYR LFPEDDGTVR
FRITATRGTH VKGELRGNPD HFDRLQIAFN DEEWRVGTAE VVHKHNEWRL HVTVTHETHR
VASKNDADTI VGVDVNEDCI ALAAMSRNGG VKQSVVFEYP SVKEQRHEFF TKRKRMQKAN
QTAFASTVQT EERDYVHDCL HKVSRRVVDW VSQFTNPVIV FEDLKDMRDS IDYGTRMNRR
LHSLPFAALQ EMVSYKAAWE GVPSDEVDPE YTSQRCPRTE CQHTERANRH RKRFKCQQCE
FQDHSDRKAA VCVVQNWFDE QSGNVPPLET LPRVRTVRRA ASGGGGAADS HGRHSRSGVT
SAEEA