Gene Nmag_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3963 
Symbol 
ID8828945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013924 
Strand
Start bp149 
End bp1411 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content56% 
IMG OID 
Productorc1/cdc6 family replication initiation protein 
Protein accessionYP_003482062 
Protein GI289937460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGAGA AATACAATCA CTTCGTAATG GCACTCTTCG AGCGGAGTGA GGAGATCTTC 
AACAACGAGA ACGTTCTCCA CGATGATTAT CAGCCTCAAT CCCTCGAAGA GCGTGACAGC
GAGATCGAAC AGTTCACGGG GTATCTCCAG CCGGTGATCA ACGGCGCACA GCCACGGAAC
ATCTTTCTCT ACGGGAAAAC TGGTGTCGGC AAGACGGCCG CAACGAAGTA TCTCTTGCAA
CACCTCGAGG AGGATTCTGA GCAGTACGAC GATGTCACGA TCACGACCGT CTATCTCAAC
TGCGAAGACC TCACGAGTAG CTACCGTGTC GCTGTCGCAC TTGTGAACAA GTTGCGCGAC
CCCGAGGAGC AGATCAGTCG CACCGGGTAT CCGTTGAATG CCGTCTACGA AATGCTGTGG
GAGAAACTCG ACGAACTCGG CGGCACGATC CTCATCGTTC TCGACGAGGT CGACTACATC
GGTGACGACG ATTCGGTCTT GTACCAGCTC CCGCGTGCTC GCAGCAATGG CAAGATCGAG
AACTCCCGTG TCGGGATCAT CGGGATTAGC AACGACTTCA AATATCGCGA GAAGCTCGAC
CCGCGTGTCG AAGACACACT CTGTGAACGC GAGCTTCATT TCCCGCCGTA TGATGCCACC
GATCTCCAGA ACATCCTCAC CAAGCGTGCC AATCATGCGT TCAAAGACGA CGTGCTCGAC
GGCGACGTCG TTCCGTTGTG TGCGGCGTTC GCAGCCCAAG ACAAAGGGAG TGCACGCCAG
GCGCTTGACC TTCTTCTCGA GGCCGGTGAT CTTGCACGCC GGCAAAGCGA CCCGGTCGTG
ACGGAAGATC ACGTCCGTGA TGCAAAGCAA CTCCTCGAGA AGCAACGCAT CGAGGAATCG
ATGAAAGAAC TCACGTCACA CGGACACCTG ACGCTACTGG CTGTCGTCGC GTCGACGGTC
GCAGACCCAG AGGCACCACT ACAGAAACAA ACGATCTACG AGCAGTACCA GGACCTCGCG
AAAGCGACCG ATCGCGACGC ACTCGGTGGC CGGGCGTTTC ACAATCATCT CGCCGAACTC
TCGATGCTCG GAATTCTCGA TCGGGCCAAA CGCAACGAAG GTCGAGCTGG TGGAATCTAC
TACGAGTACG AGGTAGACGT CCCACTCGAG GCCGCGCTCT CGACACTCGA GAACCTCCAC
ATGAGTGACG AACTTGACCT CGACTCGTTA CGGCAGAACG CACAGGAAAA GGGGCTTCTT
TGA
 
Protein sequence
MWEKYNHFVM ALFERSEEIF NNENVLHDDY QPQSLEERDS EIEQFTGYLQ PVINGAQPRN 
IFLYGKTGVG KTAATKYLLQ HLEEDSEQYD DVTITTVYLN CEDLTSSYRV AVALVNKLRD
PEEQISRTGY PLNAVYEMLW EKLDELGGTI LIVLDEVDYI GDDDSVLYQL PRARSNGKIE
NSRVGIIGIS NDFKYREKLD PRVEDTLCER ELHFPPYDAT DLQNILTKRA NHAFKDDVLD
GDVVPLCAAF AAQDKGSARQ ALDLLLEAGD LARRQSDPVV TEDHVRDAKQ LLEKQRIEES
MKELTSHGHL TLLAVVASTV ADPEAPLQKQ TIYEQYQDLA KATDRDALGG RAFHNHLAEL
SMLGILDRAK RNEGRAGGIY YEYEVDVPLE AALSTLENLH MSDELDLDSL RQNAQEKGLL