Gene Nmag_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3954 
Symbol 
ID8826824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013923 
Strand
Start bp360795 
End bp363173 
Gene Length2379 bp 
Protein Length792 aa 
Translation table11 
GC content57% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003482056 
Protein GI289583646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC AGGAAGATTC CTCCGGTCCC TCCTTTCGGT CATCACGGGA CGAGACCGAG 
GCACTGCAGC GCTCGTTGGC GCTTCTGAAC AACGTCGCCG AGGGAATTTT CCAACTCGAC
ACCGAGGGCC GGTTCATCGC AATAAACGAC TCCATTACCG ACATAACGGG CTACACTCGA
GACGACCTTC GTGGTGAACA CGTTTCAGTG CTCCTCGAGG AGGCGGACGT GACGCGTCTC
GAACGCGAAA TTCGAACGCA GCACGATGCT AGTGGTGGTC CGAACACTGG TAACGTCCCA
GACACACCGT TCAACCTCAC AATCGAGACA GCAAGCGGGA ATCCTGTCCG CTGTGAACTC
CGAATCAACC TCCCTGCCGA TGATGGGACG ACAGGAGGAA TCGTTGGCGT CGTTCGGACG
GTCGAAGCAC ACGATCAGAC GAACGATCCG CTGCCGTCGG TCTGGGAAAC CCACGAAGCG
ATTTCGTCCG TTATCGACGA AGCTGATGTC GGTGTGTTCG TTCTCGACGA AGCGTTTGAT
GTCGTGTGGA TAAACGAAAC GATCGAGGAA TACTTTGGTG TCGATCGAAC CGAGATTGTC
GGCCGAGACA AAGCAACGCT CATTCAGGAG ACAATCCGCG ATCGATTCGC CGACTCCGAG
ACGTTCGTCG AAACGGCCCT CGCGACGTAC GAGGACAATA CCTACGTCGA ACAGTTCGAG
TGCCAGATCC TCGCTGCTGA CAATCGCGAA GAACGCTGGC TCGAACATCG AAGCAGGCCA
ATCGAGTCCG GCCACTACGC GGGTGGGAGA GTCGAACTCT ACTACGATAT TAGCGACCGG
AAAACGGCCG AACGGGTCAG TCAGGAACGG AAAGAGCGGC TGCGACAAGA ACACAATTTG
ACTGAACAGA TTCTGGAGAC AGTTCCCGTT GGAATCGCCG TCGTGAACCG CGATGGGTCT
GTCGCTCGCG CAAACGAACG GATGACAGAT CTACTCGAGT TCCCACCGAA CAGCAAATCG
TACACCACAG ACCAACAGGA GATGTACGAC GAGAACGGTG AGTTTCTTCC GGTAGAAGAA
CGGCCGGTGC CCCGCGTGTT CGAAACAGGA GAGCCAGTGA TCGATCAGGA AATCCGTCTC
ACGAAGCCGG ACGGGCAGCG TCAGTGGCTC TCAGTAAATG CGAGACCGAT CGCCGACGAA
CAGGGCGACC CCAAACGAGT TCTGGAGACG GCGACGGATA TTACCGATCT GAAAGAGCTA
TCAAAGCGAC GGAAGCGAGC ACTGGACGAA CGAGAGAAAG AACTCGCTGC CATGCAACTT
GCGACGGATT TGCTCGAATC CAGAGCGGAA CCAGTAGACC AATTCATCGA CGAGTTCGTG
ACCATCCTCC CGCAATTCTT CAAGCATCCG GAACAAACGG ACGCGCGAGT GTCTATCGAC
GACGTCGTGG CGACAACGGG GACGGGGGGC GACGAACAGA TCGCAGACCG GATCACAGCC
CATACATCGA CGATCAACGG GACGCCGATT GCGATCAGCG TTGTCCACCA GGAGGCCGAG
ACCACAGAGA AGTCTATCAC CCGGACAGAG GGTTTTCTTC AGGAAGAACA GGAGTTGATC
GAGACGCTCG CACTGCTTTT GAAGCTTCAC CTGGACCGAC AGGAGTACAT CGACGGCCTC
CAGCGGTCGA ACAAGCGCCT CGAACAGTTC GCCTACGCTG CTTCACACGA CCTCCAGGAA
CCACTTCGGA TGGTCTCTAG CTACTTACAA CTCATCGAGC AGCGGTACGC TGACAAACTC
GACGCCGACG GCGAAGAGTT CCTCGAGTAT GCCGTCGACG GCGCCGAACG AATGCGAGCG
ATGATCGACG GGTTGCTACA GTACTCTCGA GTTGAGTCGC GGGGAGAACC CTTCGAAGCG
GTCGATCTCG ACGACGTATT GGCAGACGTA CTGAATGATC TTCGGCTCTC GATCGACGAA
CACGATGCTA ACATCACGTC AGACCTGCTA CCGACTGTCA AAGGTGACGC CAGTCAACTC
CGGCAGGTGT TCCAGAATCT CATCGACAAC GCCCTCGAAT ACAGCGGAGA CGACCCCCCT
CGTGTCCACG TCACTGCCGA ACGCACTGGT GATCGATGGC AGGTGACTGT GAGTGATGAG
GGAATCGGTA TCGACCCCGA AGACGCTGAC CGTGTGTTCG AGGTGTTCCA GCGACTTCAT
ACACGAGATG AGCACGCCGG GACCGGGATC GGCCTCGCAC TCTGCCGTCG TATCATCGAA
CGCCATGGCG GCGAGATTCA GGTCGAATCG GAGCCCGGTG AAGGGACGGC GTTTTCGTTT
ACCCTTCCGG TTCTCGAGGA CGAGGAGTGT GACGGGTGA
 
Protein sequence
MSEQEDSSGP SFRSSRDETE ALQRSLALLN NVAEGIFQLD TEGRFIAIND SITDITGYTR 
DDLRGEHVSV LLEEADVTRL EREIRTQHDA SGGPNTGNVP DTPFNLTIET ASGNPVRCEL
RINLPADDGT TGGIVGVVRT VEAHDQTNDP LPSVWETHEA ISSVIDEADV GVFVLDEAFD
VVWINETIEE YFGVDRTEIV GRDKATLIQE TIRDRFADSE TFVETALATY EDNTYVEQFE
CQILAADNRE ERWLEHRSRP IESGHYAGGR VELYYDISDR KTAERVSQER KERLRQEHNL
TEQILETVPV GIAVVNRDGS VARANERMTD LLEFPPNSKS YTTDQQEMYD ENGEFLPVEE
RPVPRVFETG EPVIDQEIRL TKPDGQRQWL SVNARPIADE QGDPKRVLET ATDITDLKEL
SKRRKRALDE REKELAAMQL ATDLLESRAE PVDQFIDEFV TILPQFFKHP EQTDARVSID
DVVATTGTGG DEQIADRITA HTSTINGTPI AISVVHQEAE TTEKSITRTE GFLQEEQELI
ETLALLLKLH LDRQEYIDGL QRSNKRLEQF AYAASHDLQE PLRMVSSYLQ LIEQRYADKL
DADGEEFLEY AVDGAERMRA MIDGLLQYSR VESRGEPFEA VDLDDVLADV LNDLRLSIDE
HDANITSDLL PTVKGDASQL RQVFQNLIDN ALEYSGDDPP RVHVTAERTG DRWQVTVSDE
GIGIDPEDAD RVFEVFQRLH TRDEHAGTGI GLALCRRIIE RHGGEIQVES EPGEGTAFSF
TLPVLEDEEC DG