Gene Nmag_3880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3880 
Symbol 
ID8826750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013923 
Strand
Start bp277009 
End bp278211 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content63% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003481983 
Protein GI289583573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.96055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTGG ACGGCATCCG TGTACTCGAT CTCAGCCGAT TGCTTCCCGG TCCCTACGCC 
ACACAGCTTC TGGCGGAGAT GGGTGCCGAG GTGATTCGGA TCGAACGACC GGGTGATGCA
CAATCGGGGC CGACACTCGA GTCAATAAAT CGCGGCAAGC GCCGTGTGGC GCTGAACCTC
AAGACAGAGG GTGGGCGCGA GGCGTTTCTC GACCTCGCTG CGACCGCGGA TGTCGTCCTC
GAGCAGTTCC GTCCTGGCGT GGTCGATCGG CTGGGTGTCG ACTACGACGC AGTCCGCGAG
GTCAATCCGG GAATCGTCTA CTGCTCGCTT TCGGGGTACG GACAGACGGG TCCGTACAGC
GACCGGGTCG GCCACGATCT GAACTATATC GGGCTGGCCG GCCTGCTCGA CATGACTCGC
CAGTCCGAGG ACGAGACGCC CCGAGTCCCC GGCTATCAGG TCGCAGACAT TGGCGGTGGG
CTGTTCGCGG CCCTCTCGAT CGTGGGCGCG CTGCTTTCTC GGGAACTCGG TGCTGGGAAT
CAGAATCGGA ACGGTGTAGG CGACCAGGCT GACGTGGACA ACGACGCAAC CGGCGAGTAC
ATCGACGTCT CGCTGACTGA CGCTGCCGTT TCGTTCTCAC AGGCGGTGGC TCCACGCGCA
CTCGCGGGCG GTGACCCCCG CCCCGGCGAG ACGCCGCTAA CCGGCCAGTT CCCCTGGTAC
GACGTCTACC CCGCTGCCGA GGGCTACGTT ACGCTCGCCG CGCTGGAACC GCACTTCTGG
CACGCTTTCT GCGAAGCCGT CGACCACGAG GAGTGGATCG AGTATCACAT GACTAGCGAT
CCTGCCGAAC TCGAGACGCT TCGGGAGGCA CTCGAGTCGC TCTTCAAAAC ACGAACCCGT
GACGAGTGGG TGTCGTTTTT CGAGGGGGTC GATGCAGCAG TTGGTGGCGT CTATACGCCG
GCCGAGATGG TTGAACACCC ACAGATTGTG GCACGTGGAT ACGTCGCCGG TGGAGCAGCA
GTCGGTGAGG GTGAACCACC GCCACCGGTG GTTGGCTTCC CCGCTCGTGG GACCGATATT
GACCACGATG GACCGACCGC GGTTGCAGAA CACGGTGACG ATACGGAATC GGTCCTGCAG
GAGAGTGGCT ACGAGGAGGA TGCACTCGAG CAGTTGCGCG CGTCGGGAGC AATTCCTGAG
TGA
 
Protein sequence
MNLDGIRVLD LSRLLPGPYA TQLLAEMGAE VIRIERPGDA QSGPTLESIN RGKRRVALNL 
KTEGGREAFL DLAATADVVL EQFRPGVVDR LGVDYDAVRE VNPGIVYCSL SGYGQTGPYS
DRVGHDLNYI GLAGLLDMTR QSEDETPRVP GYQVADIGGG LFAALSIVGA LLSRELGAGN
QNRNGVGDQA DVDNDATGEY IDVSLTDAAV SFSQAVAPRA LAGGDPRPGE TPLTGQFPWY
DVYPAAEGYV TLAALEPHFW HAFCEAVDHE EWIEYHMTSD PAELETLREA LESLFKTRTR
DEWVSFFEGV DAAVGGVYTP AEMVEHPQIV ARGYVAGGAA VGEGEPPPPV VGFPARGTDI
DHDGPTAVAE HGDDTESVLQ ESGYEEDALE QLRASGAIPE