Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_3880 |
Symbol | |
ID | 8826750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013923 |
Strand | - |
Start bp | 277009 |
End bp | 278211 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_003481983 |
Protein GI | 289583573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.96055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGG ACGGCATCCG TGTACTCGAT CTCAGCCGAT TGCTTCCCGG TCCCTACGCC ACACAGCTTC TGGCGGAGAT GGGTGCCGAG GTGATTCGGA TCGAACGACC GGGTGATGCA CAATCGGGGC CGACACTCGA GTCAATAAAT CGCGGCAAGC GCCGTGTGGC GCTGAACCTC AAGACAGAGG GTGGGCGCGA GGCGTTTCTC GACCTCGCTG CGACCGCGGA TGTCGTCCTC GAGCAGTTCC GTCCTGGCGT GGTCGATCGG CTGGGTGTCG ACTACGACGC AGTCCGCGAG GTCAATCCGG GAATCGTCTA CTGCTCGCTT TCGGGGTACG GACAGACGGG TCCGTACAGC GACCGGGTCG GCCACGATCT GAACTATATC GGGCTGGCCG GCCTGCTCGA CATGACTCGC CAGTCCGAGG ACGAGACGCC CCGAGTCCCC GGCTATCAGG TCGCAGACAT TGGCGGTGGG CTGTTCGCGG CCCTCTCGAT CGTGGGCGCG CTGCTTTCTC GGGAACTCGG TGCTGGGAAT CAGAATCGGA ACGGTGTAGG CGACCAGGCT GACGTGGACA ACGACGCAAC CGGCGAGTAC ATCGACGTCT CGCTGACTGA CGCTGCCGTT TCGTTCTCAC AGGCGGTGGC TCCACGCGCA CTCGCGGGCG GTGACCCCCG CCCCGGCGAG ACGCCGCTAA CCGGCCAGTT CCCCTGGTAC GACGTCTACC CCGCTGCCGA GGGCTACGTT ACGCTCGCCG CGCTGGAACC GCACTTCTGG CACGCTTTCT GCGAAGCCGT CGACCACGAG GAGTGGATCG AGTATCACAT GACTAGCGAT CCTGCCGAAC TCGAGACGCT TCGGGAGGCA CTCGAGTCGC TCTTCAAAAC ACGAACCCGT GACGAGTGGG TGTCGTTTTT CGAGGGGGTC GATGCAGCAG TTGGTGGCGT CTATACGCCG GCCGAGATGG TTGAACACCC ACAGATTGTG GCACGTGGAT ACGTCGCCGG TGGAGCAGCA GTCGGTGAGG GTGAACCACC GCCACCGGTG GTTGGCTTCC CCGCTCGTGG GACCGATATT GACCACGATG GACCGACCGC GGTTGCAGAA CACGGTGACG ATACGGAATC GGTCCTGCAG GAGAGTGGCT ACGAGGAGGA TGCACTCGAG CAGTTGCGCG CGTCGGGAGC AATTCCTGAG TGA
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Protein sequence | MNLDGIRVLD LSRLLPGPYA TQLLAEMGAE VIRIERPGDA QSGPTLESIN RGKRRVALNL KTEGGREAFL DLAATADVVL EQFRPGVVDR LGVDYDAVRE VNPGIVYCSL SGYGQTGPYS DRVGHDLNYI GLAGLLDMTR QSEDETPRVP GYQVADIGGG LFAALSIVGA LLSRELGAGN QNRNGVGDQA DVDNDATGEY IDVSLTDAAV SFSQAVAPRA LAGGDPRPGE TPLTGQFPWY DVYPAAEGYV TLAALEPHFW HAFCEAVDHE EWIEYHMTSD PAELETLREA LESLFKTRTR DEWVSFFEGV DAAVGGVYTP AEMVEHPQIV ARGYVAGGAA VGEGEPPPPV VGFPARGTDI DHDGPTAVAE HGDDTESVLQ ESGYEEDALE QLRASGAIPE
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