Gene Nmag_3655 details

Gene Information

• Locus tag: Nmag_3655
• ID: 8826523
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013923
• Strand: -
• Start bp: 41483
• End bp: 42193
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 60%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003481765
• Protein GI: 289583355

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGC GACTCGACCT CCAACTGTGG CATGAAGGGT GCTGGATGCT GTCGTTGACG 
CGAACGTATC CGGATACGAC GCTCGTCGTG ACCGACATCT GCTCCGATGG AACCGACATT 
CTGGCAACAG TCGTCGTCAG TGGCGACGGC GACCTCGATC TCGACGCAAT CGCGGACGAG 
GCAGCAGCCG CCCCTGCCGT CCGCTCGACC GACCGCCTCG ACGGCGGGAT CCAATCGCTT 
CGGATCCACA CCAGATACAA GATGGAGTCG TCGATTTACG ATGCGATCAT CAACTCGTCG 
TTGACACCGA TCGGCGATAT CCGCATCCAG GACAACGCAG AGTACTGGAC CCTGCTCGTC 
GACGGCGGTG CGATCAGCTC CGCAATTTCG ACGCTCGAGA CGGACGCAGA TGTCGATATC 
CTTCGCGTGA CTGACTACGA GCCGAACGCC TCGGCCAACC ACACCGTCAT CGACGAGATT 
AGAGACGACC TCTCCGCCCG GCAGACGGAG TATCTCCTCT CTGCACTCGA GGAGGGTTAC 
TACGGCTGGC CGCGAGACAT CGCCGCGAAG GATCTCGCCG AAAAGCACGG TGTCTCCGGA 
CCGACTGCAC TCGAACATCT TCGAAAGGGC GAGTCGGTCG TTCTCGAGCG CATTCTCGAA 
GAGGTTAGGG ATCGCGAACG GAGCGAGACG GCGCAGTTAC GCTCGTCGTA A 

 

Protein sequence

MKKRLDLQLW HEGCWMLSLT RTYPDTTLVV TDICSDGTDI LATVVVSGDG DLDLDAIADE 
AAAAPAVRST DRLDGGIQSL RIHTRYKMES SIYDAIINSS LTPIGDIRIQ DNAEYWTLLV 
DGGAISSAIS TLETDADVDI LRVTDYEPNA SANHTVIDEI RDDLSARQTE YLLSALEEGY 
YGWPRDIAAK DLAEKHGVSG PTALEHLRKG ESVVLERILE EVRDRERSET AQLRSS