Gene Nmag_3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3545 
Symbol 
ID8826413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand- 
Start bp3684795 
End bp3685469 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content62% 
IMG OID 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003481657 
Protein GI289583191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.773914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAGG CGACCCTCAC AATCACGCTG CCCGACCACG TCTGGATTCA ACAGGTATCG 
ACGTCGAACC CGGACGCAAC GTTCCGGGTG CTCGCTGCGG TTCCCGGTGC AGACACCGGC 
TTCGCGCTGG TCCAGATCAC CGGGTCGAAC GTCGAGCAGG TCCTCGAGAC GATGGAAGAC 
CATCCCCAGC TGACGGAGGT GACCCTCACA CAGCGAACCG ACGGCGAGGC GACGGTGCAC 
TTCGAGACGA CGAAGCCGTT GCTGTTGTTC TCCTCGCGAG ACGCCGGCAT GCCGATCGAG 
CTTCCGGTCA TGATCCAGGA CGGAACCGCG ACGGTCGAGG TGACCGGCTC GCGGGAGCGG 
CTGGGCGAAC TTGCAGCGCA GTTCGAACGG CTTGGGCTGC AGTATCGCAT CGAAACCGTC 
ACGGAACAGT TACACGAGAG CCAACTGCTC TCGGATCGCC AGTACGAGGT CCTCGTTGCT 
GCAGTCGAAC AGGGCTACTA CGATACGCCG CGCCGAAGCT CTCTGACCGA ACTCGCAGAG 
CATCTGGGTA TTGCCAAATC GACGTGTAGC GAGACGCTTC ACCGGGCTGA GGAAGCGATT 
ATCAAGCGGT TCGTCGACCG CGTTCCCGAT GCTGATTCCG AGACAGCACT CGAGGAGCAA 
CTCGCTCGTA GCTAA
 
Protein sequence
MAQATLTITL PDHVWIQQVS TSNPDATFRV LAAVPGADTG FALVQITGSN VEQVLETMED 
HPQLTEVTLT QRTDGEATVH FETTKPLLLF SSRDAGMPIE LPVMIQDGTA TVEVTGSRER 
LGELAAQFER LGLQYRIETV TEQLHESQLL SDRQYEVLVA AVEQGYYDTP RRSSLTELAE 
HLGIAKSTCS ETLHRAEEAI IKRFVDRVPD ADSETALEEQ LARS