Gene Nmag_3535 details

Gene Information

• Locus tag: Nmag_3535
• ID: 8826403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 3672179
• End bp: 3674233
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 61%
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_003481647
• Protein GI: 289583181

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGTGA CACTTCGCTC CGTTCCGGTC GTCGACCGGA TTACGGACGC CTTCTTCGCG 
CTCGATACGG ACTTTCGGTT TACGTACCTC AACGACCGCG CGGAGACGCT TCTCGAGCGC 
TCCCGTACGG ACCTGATCGG CCGTGTCATG TGGGACGAGT TTCCACAGAC CGTCGAAACG 
CAGTTCCCCG ACGGCTTTCA CCGTGCAATG GAGAAACAGG TCTCCGTCTC GTTCGACATC 
TACCACGCTC GACTCGAGAC GTGGTTCGAA ACGACGGCCT ACCCCTCCGA AGGCGGACTC 
TCGGTGTACA TGCGAGACGT CACCGAACGC AAGGAACAGG AGCGCGTGAT CGCACAGCAT 
GCCGCCGTTG TAGAGGCCAT CTCCGATGCC ATCATCACGC TCAATCGCAA CCGCGAAATT 
GTCTCGGTCA ACGAGGCCAT GGAGTCGTTC CTCGGCGTCG ACCGCACGGA ACTGATCGGC 
GAACACGTCG AAATCGTTCC CGAACTGGCC GAAATCGGCG ACGAACACGC AGTCGAGATG 
GGCCGCGCCA TCACTGACGT TGACATCGGA ACCGCCGACA CGCGCCACGT CGAGGTCCCG 
TTCACCGATG CCCAGGGAAC GGACCGAATG GGCGAATTCC GTTTCGTCCC AATCGAAGAC 
AACAACGCGA CCGTCGCCGG CGTCATGCGC GACATCACCG ATCAGTACGA GTACGAACGG 
ATCGCTGCCT CACTGCACGA GATTACGCGC TGGCTACTCG AGTCCGACGA TCCCGAGGAG 
ATCTGTTCGA TTGCGGTCCA CGCCGGCAGC GACCTGCTCA ATCTGCCGAT CAGCGGAATC 
TGGCTGCTGG ACGAGGAGCA AGGGTATCTC GACCCTGTCG CCGGAACGGC TGGTGCGTAC 
GAGGAGTTCG GCGGCCTCCC GCGATTCAAC CCGCCACAGG GGCTCATCTG GGATGTCTTC 
GAGGCTGGCG AAGTCGAACG CTTCGATGAC CTGAGTGAAG TCGATGGGCT GTACAACGAC 
GAGACGCCGT TGCAGTCAGA AGTCATCGCG CCCATCGGTA CTCACGGCGT CCTGATGACC 
GGCTCGCTAC AGCCGGATCG ATTCGACGAA ACTGACGTCG AACTGCTCTC GACGCTGGTC 
GAAAACACCC GGGCGGCGCT CGACCGCGCC GACCGCGAGC AACTCCTGCG CGAGCGCACG 
AGCGACCTCG AGCGCCAGAC CGAACGCCTC GAAGGAATCG CGGACGTGCT CTCGACAGAT 
CTCAAACGAC AGCTCGATGC TGTCGCCGAC GCACTCGAGG ACGAACGTGC ACAGACAGGG 
GTTGGGAGCA GTACTGAGGG AGAGGCTACC ACTAGCATCA ATATCGACAC CAAACCCGAC 
ACCGACACCG ACACCAACAC CAACACCAAC AGCGGCAACA ACGACGATGT CTGGGAGTTT 
CCACTCGCCG AAGACTCCGT CACAACCATG CTCGACCGGA CGGAGCGACT CGTCGACGAC 
GTGCGAGAAT TCGCCCGGAA CGCGACCGCC GTCGGCCCGC GAAACCGGAT CCTTCTCGAG 
CAGGCAGTCA ACACGGCAGC AGCGACATCG CGACTCGACG CAGACGCAGT GAAACTCGAA 
CAGCCGGCCG TGCTTCGTGC GGACGCCGAA CGCTTCACTC GGCTTCTCGA AACCGCGTTC 
GACGATATTG CTGATCGCAT CGACGAACAG GAGACAGCCG CCTCCAACGA GACCGTCGTC 
CAAATCGACT TGCTCGGCGT TTCGCCGGAC GAACAGTCGA CACACGACCA GCAACAGGCG 
GTTATCGGAA CCGAATCGAC CGACCGATCG CGTGGGTTTG CACTGGTCGA CACCGCCGCG 
TTGGCACCGA CCGATCCGGC AGATCGGATC TTCGACACCG AATCAGACCC CACGGAGTCC 
GAAACAGTCG ATGGACTGGG CCTCGCGCTC GTCCGCGCGA TTGCGAACGC ACACGATTGG 
ACGCTCTCGA TCGACTCTGC CGAGAACGGC ACTCGCATCG AGATTCAGGA CGTAACGACA 
CTCGAACCAC TGTAG 

 

Protein sequence

MDVTLRSVPV VDRITDAFFA LDTDFRFTYL NDRAETLLER SRTDLIGRVM WDEFPQTVET 
QFPDGFHRAM EKQVSVSFDI YHARLETWFE TTAYPSEGGL SVYMRDVTER KEQERVIAQH 
AAVVEAISDA IITLNRNREI VSVNEAMESF LGVDRTELIG EHVEIVPELA EIGDEHAVEM 
GRAITDVDIG TADTRHVEVP FTDAQGTDRM GEFRFVPIED NNATVAGVMR DITDQYEYER 
IAASLHEITR WLLESDDPEE ICSIAVHAGS DLLNLPISGI WLLDEEQGYL DPVAGTAGAY 
EEFGGLPRFN PPQGLIWDVF EAGEVERFDD LSEVDGLYND ETPLQSEVIA PIGTHGVLMT 
GSLQPDRFDE TDVELLSTLV ENTRAALDRA DREQLLRERT SDLERQTERL EGIADVLSTD 
LKRQLDAVAD ALEDERAQTG VGSSTEGEAT TSINIDTKPD TDTDTNTNTN SGNNDDVWEF 
PLAEDSVTTM LDRTERLVDD VREFARNATA VGPRNRILLE QAVNTAAATS RLDADAVKLE 
QPAVLRADAE RFTRLLETAF DDIADRIDEQ ETAASNETVV QIDLLGVSPD EQSTHDQQQA 
VIGTESTDRS RGFALVDTAA LAPTDPADRI FDTESDPTES ETVDGLGLAL VRAIANAHDW 
TLSIDSAENG TRIEIQDVTT LEPL