Gene Nmag_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_3456 
Symbol 
ID8826322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp3592233 
End bp3593411 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content64% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_003481568 
Protein GI289583102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00954792 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAC TCGACGATAT CACGGTCGTC AGCCTCGAAA GCGGCATCAG CGCACCGCTG 
TGTACACGAC TGCTCGGCGA CTTCGGCGCG GAAGTCATCA AGGTCGAGCG CCCCGGACTC
GGCGACGTCA ACCGCCACTG GGACTCGGTG GTCTACGGCG ATTCCTCGGC CCACGCCTGG
GTCGACCGCA ACAAGCTGAG CATCGAGTTG AACCTGAAGG CCGAGCGAGG GACCGACCTC
TTTCACGAAC TGGTCGAAGA GGCAGATGTC GTCGTCCAGA ACTACTCACC TGGCGTCGTC
GAACGCCTTA GCGTCGGCTA CGAGGACGTC TGTGAGACCA ACGAGGAGGT CATCTATCTC
AACGTCTCGG GCTACGGGCG AGACGGCCCC TACAGCGACC GCAAGGCCTA CGACATGGTC
ATGCAGGGCG AAACCGGGCT GATCCAGATG AACGGCTCGC CGGACGCGCC GGCCAAGATA
CCCCTGAGCG TCTGCGACAT CAACGCGGCG ACCTACGGCA CCATCTCGAC CCTGCTCGCG
CTCTTCCACC GCGAGCGAAC CGGCGAGGGG CAAGAGATCG ACGTCACCAT GTTCGGCGGC
ATGCTCTCCT GGCTGGGCTA CTTTCCGCAC AAGTACTGGC ACAACGACGA ACTGCCCGAG
CGGATCGGGA TGCGCCACCA CCTGCTGACA CCCTACGGTC CCCACGAGAC GGCCGACGGC
CAGTACGTCA ACTTCGCGAT TCTCAGCGAG GCCCACTGGG AAACACTCTG CGAAGACGTA
CTCGAGTCCC CCGGCCTGCT CGCAGACGAG CGCTTCGCAA CGAACGAGCA GCGCGTCGAG
CACCGCGACG TACTCGAACC CACAGTCGAG TCGCTCATCG CCGAGCAGCC GCGAGACTAC
TGGGCCGAAC GCCTCGCGGA CGCGGGCATC CCCTGGGGTG ACGTCAACGA ACTCGACGAC
GTTCTCTCGC ACCCCCAGAC CGAGCATCTC GACCTCGTGA AGGAACTCGA AACCGAGGAG
GGGCCCGTCA AGTACGTCGA TACCCCAATC GAGTTCGGGG CACTCGAGTT CGCCCGCGAG
CCGATGCCCG ACCTCGGTGA GCACACGGCG GACGTTCTGT CTGCACTCGG CTACGATGCC
GACGAGATCG AAGCACTTCG GACAGCGGAG GTGATCTGA
 
Protein sequence
MQALDDITVV SLESGISAPL CTRLLGDFGA EVIKVERPGL GDVNRHWDSV VYGDSSAHAW 
VDRNKLSIEL NLKAERGTDL FHELVEEADV VVQNYSPGVV ERLSVGYEDV CETNEEVIYL
NVSGYGRDGP YSDRKAYDMV MQGETGLIQM NGSPDAPAKI PLSVCDINAA TYGTISTLLA
LFHRERTGEG QEIDVTMFGG MLSWLGYFPH KYWHNDELPE RIGMRHHLLT PYGPHETADG
QYVNFAILSE AHWETLCEDV LESPGLLADE RFATNEQRVE HRDVLEPTVE SLIAEQPRDY
WAERLADAGI PWGDVNELDD VLSHPQTEHL DLVKELETEE GPVKYVDTPI EFGALEFARE
PMPDLGEHTA DVLSALGYDA DEIEALRTAE VI