Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_3456 |
Symbol | |
ID | 8826322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013922 |
Strand | + |
Start bp | 3592233 |
End bp | 3593411 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_003481568 |
Protein GI | 289583102 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00954792 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCAC TCGACGATAT CACGGTCGTC AGCCTCGAAA GCGGCATCAG CGCACCGCTG TGTACACGAC TGCTCGGCGA CTTCGGCGCG GAAGTCATCA AGGTCGAGCG CCCCGGACTC GGCGACGTCA ACCGCCACTG GGACTCGGTG GTCTACGGCG ATTCCTCGGC CCACGCCTGG GTCGACCGCA ACAAGCTGAG CATCGAGTTG AACCTGAAGG CCGAGCGAGG GACCGACCTC TTTCACGAAC TGGTCGAAGA GGCAGATGTC GTCGTCCAGA ACTACTCACC TGGCGTCGTC GAACGCCTTA GCGTCGGCTA CGAGGACGTC TGTGAGACCA ACGAGGAGGT CATCTATCTC AACGTCTCGG GCTACGGGCG AGACGGCCCC TACAGCGACC GCAAGGCCTA CGACATGGTC ATGCAGGGCG AAACCGGGCT GATCCAGATG AACGGCTCGC CGGACGCGCC GGCCAAGATA CCCCTGAGCG TCTGCGACAT CAACGCGGCG ACCTACGGCA CCATCTCGAC CCTGCTCGCG CTCTTCCACC GCGAGCGAAC CGGCGAGGGG CAAGAGATCG ACGTCACCAT GTTCGGCGGC ATGCTCTCCT GGCTGGGCTA CTTTCCGCAC AAGTACTGGC ACAACGACGA ACTGCCCGAG CGGATCGGGA TGCGCCACCA CCTGCTGACA CCCTACGGTC CCCACGAGAC GGCCGACGGC CAGTACGTCA ACTTCGCGAT TCTCAGCGAG GCCCACTGGG AAACACTCTG CGAAGACGTA CTCGAGTCCC CCGGCCTGCT CGCAGACGAG CGCTTCGCAA CGAACGAGCA GCGCGTCGAG CACCGCGACG TACTCGAACC CACAGTCGAG TCGCTCATCG CCGAGCAGCC GCGAGACTAC TGGGCCGAAC GCCTCGCGGA CGCGGGCATC CCCTGGGGTG ACGTCAACGA ACTCGACGAC GTTCTCTCGC ACCCCCAGAC CGAGCATCTC GACCTCGTGA AGGAACTCGA AACCGAGGAG GGGCCCGTCA AGTACGTCGA TACCCCAATC GAGTTCGGGG CACTCGAGTT CGCCCGCGAG CCGATGCCCG ACCTCGGTGA GCACACGGCG GACGTTCTGT CTGCACTCGG CTACGATGCC GACGAGATCG AAGCACTTCG GACAGCGGAG GTGATCTGA
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Protein sequence | MQALDDITVV SLESGISAPL CTRLLGDFGA EVIKVERPGL GDVNRHWDSV VYGDSSAHAW VDRNKLSIEL NLKAERGTDL FHELVEEADV VVQNYSPGVV ERLSVGYEDV CETNEEVIYL NVSGYGRDGP YSDRKAYDMV MQGETGLIQM NGSPDAPAKI PLSVCDINAA TYGTISTLLA LFHRERTGEG QEIDVTMFGG MLSWLGYFPH KYWHNDELPE RIGMRHHLLT PYGPHETADG QYVNFAILSE AHWETLCEDV LESPGLLADE RFATNEQRVE HRDVLEPTVE SLIAEQPRDY WAERLADAGI PWGDVNELDD VLSHPQTEHL DLVKELETEE GPVKYVDTPI EFGALEFARE PMPDLGEHTA DVLSALGYDA DEIEALRTAE VI
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