| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_3391 |
|---|
| Symbol | |
|---|
| ID | 8826257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | + |
|---|
| Start bp | 3522823 |
|---|
| End bp | 3525114 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | Catalase |
|---|
| Protein accession | YP_003481503 |
|---|
| Protein GI | 289583037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.135276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CACCACACGA CGATCAGCCG GACGGTGGAA CCGAGCGCGA ACACGACCAG
CCAGGCGAGC GTGGAGACCC AACAGACGGA GACCAGGACC CGGTCGCCGA CGGCGGCTCC
GACTCGAGTA CGCCTGGGAC CAGCGACAGC CACGACGGTG AGATTGACGA GACCAGCAAA
CACGACCAGC TCGATGAGGT TCGTGAGAAT CCCGAGGGAG AGGAGTTGAC GAGCGACCAC
GGTGTCAAGA TCAGTGACAC GGATAACTCC CTGAAGGCCG GCGAGCGCGG GCCGACGATC
ATGGAGGACT TCCACTTCCG GGAGAAGATG ACCCAGTTCG ACCACGAGTC GATCCCGGAG
CGCGTGGTCC ACGCCCGCGG GACGGGTGCG CACGGCTACT TTCAGCCCTA CGAGGACCCG
GACTTGGGCG ACGAGTACGA CGACATAGAG GAGGTGACGA AGGCGAAGGT GCTGACCGAT
TCTGACCAGA AGACACCGGT TTTCACCCGG TTTTCGACCG TCGTCGGCTC ACGTGGGTCC
TCGGACACCG TCCGGGACGT CCGTGGCTTC GCGACGAAGT TCTATACGGA GGAGGGCAAC
TGGGACCTCG TCGGGAACAA CATGCCGCCC TTTTTCATCC AGGACGCGAT GGAGTTCCCG
GACCTCGTCC ACGCGATCAA ACCCGAACCC GACGACGGGA TGCCCCAGGC CTCTGCGGCC
CACGACACGT TCTGGGACTT CGCCTCCCTC AAGCCGGAAA TCAGCCACAT GATCATGTGG
GTGCTCTCAG GTCGCGCCCT CCCACGGGCC TACCGGATGA TGCAGGGTTT CGGCGTCCAC
ACCTTCCGAC TGGTCAACGA CGATGGCGAG TCGGTGTTCG TCAAGTTCCA CTGGACGCCC
GAACTCGGCA CCCATCAGCT CGTCTGGGAC GAGACGACGA AGCTCTGGGG GAAGAGCTCG
GATTTCAACC GAAAAGGGCT CTACGACGTC ATCGAGGAGG GGTACGATCC CGAATGGGAA
CTCGGCATCC AGATCTTCGA CGAGGAACAG GCCGAGGAGT TCGACTTCGA CGTCCTCGAT
CCGACGAAGA TCGTCCCCGA GACCGAGGTT CCAGTACGGC CGATCGGCAA GATGGTCTTG
AACGAAACGC CGGACAACTT CTTCGCCGAA GTAGAGCAGG TCGCGTTCCA CCCCGGCAAC
GTCGTCCCCG GCATCGACTT CTCGAACGAC CCGCTCTTGC AGGGCCGGCT GTTCTCCTAC
CAGGACACCC AGCTCAACCG CTTCGGCAGC GCCAACTGGG ACGAAATCCC GATCAACCGG
CCCGTCGCCG AACGGCACAA CAACCAGCGC GCCGGGTTCA TGCGCCAGGA GATCAACGAG
GGGAAGGCTT CCTACAAGCC GAACTCGATC GGCGACGACG ACCCACAGGA GGTTCCCGAG
GAGGAAGGCG GCTACGAACA CTACGCCGAG AAAATCTCCG GGAAGAAGAT TCGCAATCGC
AGCGACAGCT TCGAGGACCA CTTTACGCAG GCGCGGCTGT TCTGGAACAG CATGTCCGAG
CCCGAAAAAC AGAACATCGT CGACGCCGCC CACTTCGAGC TCGGCAAGGT CGATCGCATG
GAGATTCGCG AGCGGATGGT CTACGACCTG TTCAACAACG TCGACCACGG GTTCGCGAAA
CGGGTCGCCG AAGGGATCGG CGTCGAGCCA CCCGAATCGC CCGGTGACGA GCTGCCGGAC
CACGACCGGG AGGATCCGTC GCTCAGCATG GAAAACCGGA CCCCAGACAC GATCGAGACC
CGCAAAATCG CGATGCTAAT CGACGATGAC TTCGACGACG AACACGTCTC GGAGCTTCGA
TCGGCACTGG AGGACGAGGG CGCTCGAGTG AAGATCATCT CGAAGGTCCT CGGCGAGAAA
TCGGGGGCTA ACGGTGAGAC GGTCGAACCG GACAAACACC ACGTCGCGGC GGCCTCGGTT
TCGTTCGACG CGGTCCTCGT TCCCGGCGGC AGCGAGAGCG TCGACGCAAT GACCCAGCAG
GGCGATCCGA AGCACTTCGT CGCCGAGGCG TTCAAACACT ACAAGCCAAT CGCCGCAGTC
GGCGAGGGAA CGGAGCTGTT CGAGGCGGTC GACCTGCCGG ATACGGATAT CGCCGACGAT
GGCGACCTCG TCTCGGACGC CGGCGTCGTT ACCTGTCGGA ACGACGATCT GGACGAGTTC
GCCGAAAAAT TCATCGACGC GATTGCCCAG CACCGCCACT GGGACCGGGA TCCGGAAGCA
GTCCCAGCGT AG
|
|---|
| Protein sequence | MPDTPHDDQP DGGTEREHDQ PGERGDPTDG DQDPVADGGS DSSTPGTSDS HDGEIDETSK
HDQLDEVREN PEGEELTSDH GVKISDTDNS LKAGERGPTI MEDFHFREKM TQFDHESIPE
RVVHARGTGA HGYFQPYEDP DLGDEYDDIE EVTKAKVLTD SDQKTPVFTR FSTVVGSRGS
SDTVRDVRGF ATKFYTEEGN WDLVGNNMPP FFIQDAMEFP DLVHAIKPEP DDGMPQASAA
HDTFWDFASL KPEISHMIMW VLSGRALPRA YRMMQGFGVH TFRLVNDDGE SVFVKFHWTP
ELGTHQLVWD ETTKLWGKSS DFNRKGLYDV IEEGYDPEWE LGIQIFDEEQ AEEFDFDVLD
PTKIVPETEV PVRPIGKMVL NETPDNFFAE VEQVAFHPGN VVPGIDFSND PLLQGRLFSY
QDTQLNRFGS ANWDEIPINR PVAERHNNQR AGFMRQEINE GKASYKPNSI GDDDPQEVPE
EEGGYEHYAE KISGKKIRNR SDSFEDHFTQ ARLFWNSMSE PEKQNIVDAA HFELGKVDRM
EIRERMVYDL FNNVDHGFAK RVAEGIGVEP PESPGDELPD HDREDPSLSM ENRTPDTIET
RKIAMLIDDD FDDEHVSELR SALEDEGARV KIISKVLGEK SGANGETVEP DKHHVAAASV
SFDAVLVPGG SESVDAMTQQ GDPKHFVAEA FKHYKPIAAV GEGTELFEAV DLPDTDIADD
GDLVSDAGVV TCRNDDLDEF AEKFIDAIAQ HRHWDRDPEA VPA
|
|---|
| |