Gene Nmag_3138 details

Gene Information

• Locus tag: Nmag_3138
• ID: 8825999
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 3252223
• End bp: 3254277
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 58%
• Product: Type II secretion system F domain protein
• Protein accession: YP_003481252
• Protein GI: 289582786

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.160866
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCTCA AAACCGATTC TAGCGCCACC TCTGGGAACG TTTCCGGTGG TTCCGACCTC 
CTCGGTGAAA CGTTCTACCC CCTCTATGAC GTGCTCTTCA GCGAGGACAG CGAATTCGTC 
AAGGACGTCG AGACGAAACT CACCCAGGCC CGGATGACCG ATACGGTCGA GATGTACCTC 
TCTCGGTCGC TCGGCATCGG CTTCATCAGC GGCCTCGCAC TCTGGCTGAT CGGACTGACG 
CTTGGCTATC TCCTGTTTGC AACCGGACTC ATCGCCGTCG ACGTCATTAT CGGCTTCCCC 
GTTGGCAACG AGACACTGCT CGCGATCATC GAGGCACTTC GAATTCCGGC GCTCGTCTTC 
GTCACCGGAC TCATATTCGG GACGATTGGC TTCGCCCTCG GCTTTGGCTC ACTGGTCGCG 
ATACCCTACT CTCGTGCTTC CGCTCGGAAG CGTGAGATCA ACATGCTGCT CACAGACTCC 
GTCTCGTTCA TGTACGCGCT GTCGGTCGGT GGCCTGAACC AACTCGAGAT CATCGAGGCG 
ATGGCCCAGG CCGACGACAC CTACGGCGAG GTCGCAAAGG AGTTCCAGAG CATCGTCAAG 
GAAACCGAGT ACTTCGACGT CGACTACCGA ACTGCGATCC GAAATCAGGC GATCGAGACG 
CCGAGCGACG AACTCTCGCA GTTCCTGACG GACATGCTCT CGATCGTCAA CAGCGGCGGT 
GACATGGAGA GCTTCCTCGA GGACAAGAAA GAAAAGCACA TGCGAACAGC CAAGCAGGAA 
CAGGAGATCA CCCTCGAGAC GCTCGAACTC TTCGGCGAGA TGTATATGAC GCTCTCGCTG 
TTCCCACTCC TGTTGATCAT CATCATGGTC GTCATGCAGA TGATCCCGCA GGCGGATGTC 
ACCAACGAGA TGCTGTACAT GACCGTCTAC GGGCTGATTC CGCTCACAGG GATCGGGTTC 
CTCGTCCTCG TTTCGACGGT CAAACACGAC GAACCGGGCG ATGGCTTCCT CTCGAACACG 
ACCGGCGACA AACACGTCCA GAGTGGGTCT GAGCGAGGGC TGTTGAACCT CGGCCTCGTC 
GAGCAGTTCA CCGGCGAACA CAGCGTCTTC GACCGCATCA AGAACCGCGA GGGGACCCAC 
GAGACACTCG AGGTGCTCAA GCGACCACAC ATCTTCTTCC GAGATAATCC GCTGTACACC 
CTCGCAGTCA CGGTTCCGAC GGCACTCGTG GTCGTGACGA CTGCGATGAT GACCGGCGCA 
GCACCGCTCT CCTGGAGTGC GCTGCTCAAT AACGTCATCT GGGGGACGGT GCTCTACGTC 
TACATTCCGT TCTACATCAT CGCGATCCCA CTCTCGATCT TCCGCGAGTG GAACGTTCGC 
CACCGTAACA CCGTCGTCAA GACGCTCTCG GAAGACCTCC GAAAGCTCTC GAGTGCGAAC 
GACACAGGAC TGACCCTACT CGAGTCGTTC CAATCCGTGG CCGACACGAC GAACGGCAAA 
CTTGCCCGCG AGTTCGAGTT GATGCACACG AAGGTCAACT ACGGAACGAG TCTGAAGGCG 
GCGCTCATCG AATTTAACAA CAAGTACCAC ATTCCGCGAC TCGCACGGAC GACGCGGCTC 
ATTACGGAAG CACAGGAGGC ATCCAACCAG ATCACAGACG TGCTCCGAAC GGCTGCGAGC 
GCGAGCGAGA ATCACGACGA TATCGAGCGC GAGCGCAAGT CTCGAACCCG GATGCAGGTC 
GTCATCATTA TCATGACGTT CCTGACGGTG CTCGCCGTGA TCGCGATTCT CAAGACCCAG 
TTCATCGACA CGATGGCGGG GCTGGAAGCA GGCGGTGGCG ATGCCGGTGC CGACAGTGAA 
CTCGCCCAGG CAGACCTGAG TGACAACATC AATATCGACA TGCTCTCAGC GTTGTTCTTC 
CATGCAGTGA CGCTGCAGGG AATCATCTCC GGGTTCATCT GTGGCTATAT CCGCGATGCT 
GACGTACTGA GCGGACTCAA GTACGCGATC GTGCTGGCGA CGATCGCGCT TCTCGGCTGG 
ACGCTGGTGG CCTAA 

 

Protein sequence

MSLKTDSSAT SGNVSGGSDL LGETFYPLYD VLFSEDSEFV KDVETKLTQA RMTDTVEMYL 
SRSLGIGFIS GLALWLIGLT LGYLLFATGL IAVDVIIGFP VGNETLLAII EALRIPALVF 
VTGLIFGTIG FALGFGSLVA IPYSRASARK REINMLLTDS VSFMYALSVG GLNQLEIIEA 
MAQADDTYGE VAKEFQSIVK ETEYFDVDYR TAIRNQAIET PSDELSQFLT DMLSIVNSGG 
DMESFLEDKK EKHMRTAKQE QEITLETLEL FGEMYMTLSL FPLLLIIIMV VMQMIPQADV 
TNEMLYMTVY GLIPLTGIGF LVLVSTVKHD EPGDGFLSNT TGDKHVQSGS ERGLLNLGLV 
EQFTGEHSVF DRIKNREGTH ETLEVLKRPH IFFRDNPLYT LAVTVPTALV VVTTAMMTGA 
APLSWSALLN NVIWGTVLYV YIPFYIIAIP LSIFREWNVR HRNTVVKTLS EDLRKLSSAN 
DTGLTLLESF QSVADTTNGK LAREFELMHT KVNYGTSLKA ALIEFNNKYH IPRLARTTRL 
ITEAQEASNQ ITDVLRTAAS ASENHDDIER ERKSRTRMQV VIIIMTFLTV LAVIAILKTQ 
FIDTMAGLEA GGGDAGADSE LAQADLSDNI NIDMLSALFF HAVTLQGIIS GFICGYIRDA 
DVLSGLKYAI VLATIALLGW TLVA