Gene Nmag_3112 details

Gene Information

• Locus tag: Nmag_3112
• ID: 8825972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 3219530
• End bp: 3220318
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 67%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003481226
• Protein GI: 289582760

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.386919
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGAGT TCGTCTTCGC CCTGGAGTAC GAACCGGGAA CCAACCCGGT CGCCGACGTC 
CTCGCGGACC ACCCTGACGC GTCGGTCCGC TCCCTGTCGT GTCACGTCAG CGCCGACAGC 
CTCTGGCGCG TCGACCTCGC GACTGGCTCC GAGACCGCCC TCGCTGAACT GGAGGCCGCC 
TACGAGACGG CGGACTACTT CGCCGACTGT CTCGTGAAGG ACGACTGCGG TGCAGACTGT 
GAGGTCCAGG TTCTCGACCG CTCGAGTGAT ACGCTCGTCG TCTACACCTA CTGGGACCGA 
ACCGATGTCT GCACGTCGGT CCCCCACGTC GCCCGCGAGC ACCTCGGCGA CGGAATGCTG 
TTCGAGACCT ACCGTGAAGG CGGACGCTAC CGCTGGCGGA TCGTCCTCGC GAGCGATGCA 
CCGATCCACG CGTTCTTCGA CGCACTCGGC GAGGAGGTCG GCGAGTGTAC CGGCATGGAG 
ATGCTCCGGC TGACGGAACT CGATCCGGAA CACGGCGGGA ACGGCGCGGC TGCCGGTGCC 
GAAACCGGCG GTGTCGCCAA CGGCGCTCTC GCTGACTCCC TCCCGACGGA ACAGCGCGAG 
GCCCTACAGG CGGCGGTCGA CCGCGGCTAC TACGAGACGC CTCGCCGGAT CGACCTCTCG 
GAACTCGCCG AGGAACTCGA CGTCCCGCGC TCGACGCTCT CCTATCGCCT CCGCCGAGCC 
GAGGCGACGC TTGCAACGAC GTTCGTCAGC GAGGCAGACT CGATCGAGCA GTTAGCTGCT 
GGACTCTAG 

 

Protein sequence

MREFVFALEY EPGTNPVADV LADHPDASVR SLSCHVSADS LWRVDLATGS ETALAELEAA 
YETADYFADC LVKDDCGADC EVQVLDRSSD TLVVYTYWDR TDVCTSVPHV AREHLGDGML 
FETYREGGRY RWRIVLASDA PIHAFFDALG EEVGECTGME MLRLTELDPE HGGNGAAAGA 
ETGGVANGAL ADSLPTEQRE ALQAAVDRGY YETPRRIDLS ELAEELDVPR STLSYRLRRA 
EATLATTFVS EADSIEQLAA GL