| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_2955 |
|---|
| Symbol | |
|---|
| ID | 8825815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | + |
|---|
| Start bp | 3041440 |
|---|
| End bp | 3043080 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | conserved repeat domain protein |
|---|
| Protein accession | YP_003481069 |
|---|
| Protein GI | 289582603 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG GACGTGGGCA TAGAGACGGA TCGGGACGCG AACAGCACGG AGACTACGGA
AACCACGGAG CACACGAAAA ACACGAACGT CGCCATCGAG TCGACCGGGG CGAGTGGGCG
CTGTTCGCCT CGCTCGCACT CGCAGGCGTT GGGTTGCTCA TGGGGAGTCA GGTGCTCGTC
GCGGCGGCGA CGGTGCCGCT GTGCTACGTT GCGGCGGCGG TGTTTCGCAC GCGGCAGGAG
CCGTCCGTTC GGATTCGACG GGAGTTCCAG ACGGACGGCG GTGTCGGTCG CTCAGGCGGG
AGCGAGTGTG CAGATGGAGA TAAGAATGGG GATACTACTA CCGTCACTAC CGCTACCACT
ACCACTACCG CTACCACTAC CGCCTCTCCC ACCACTACAG CCGCCACAGC TGCCACGGGT
TCCACAGCCG CCACAGCCGC CACAGCCGCC ACAGATTCCA CAGCCGCCAC GGATTCCACA
GCCACCACAG ACACCACCGT CACCGGCAAC CCCGGGGAAA CCGTCACCGT CCACACCACC
GTCGAAAACA CCGGTCACAC AGCACTCGTC GACCTTCGAC TCGTCGACGG CGTCCCCGAC
GCCCTCCCGG TCGTCTCTGG AACCCCGCGC CACGCAACCA CACTCGAGCC CGGTGGCACG
ACAACACTCG AGTACGACGT CGAACTGCGC CGGGGCGACC ACGAGTTCGG GACGGCAGCG
CTGCGGGCGC GTGATCTGAC GGGAACGGTC ACGGAAACGC GGACGGAGCC GGTCGGCGGG
GCCACGCGCC TGCGCTGCTG GCCGTCCGTC GAGGACGTCC CGCTGACGAG CGGCAGCGAC
GAGTACGCAG GCGAGGTGCC GACAGACGAG AGCGGCAGTG GCCTCGAGTT CCACTCGGTG
CGAGAGTACG CCGCGGGCGA CCCGGCGCGG TCGATCGACT GGCGTCGGTA CGGTCGAACG
CGAGAGTTAG CGACGGTCGA GTACCGGGCG GAGCGCTCGA CGCGTATCGT CTGCGTCGTC
GACGCGCGGA CGAGTCAGCG GCGGGCGTCA GTAGCTACCG AACTGGCTGG CGTCGAACTG
TCTGCGAGTG CGGCCGAGCG GGCCAGTGAG TCGCTGCTCG ATGCGGGGTA TCCGACCGGC
GTTGCGACGC TGTACGTTCG CACGGTCGCC GCGCTTTCGC CGGGGACCGA CTCGAGTACC
CGGAAGCGAC TGACCGAACA GCTACAGCGT GTTCGTGATC GCGACGCGAA CGAGTCCGCC
GACCTGCAGC GCCTGGTCGG GTCGCCGGTC AAGACTCTTC CGCGGCTGTT GCCCGACGAG
GCGCAGGTGT TCCTGTTCTC CTCGTTCGTC GACGACGAGC CACTGGCGCT GGTCAAACGG
CTGCGACAAC TCGGCTATCA GGTTCGGGTC GTGAGCCCTG ACGTGCTCGG CGACACTGCG
GGTGAATCCG CCAGCTCGGA ACCGAGACAA CGCGATGCAA CCCAGACGAG ACACGACACT
GGTGCGCGAC TCGAGGCGCT CGACCGCGAA GCCAGACTCG CCCAGGCACG GGCGGCGGGG
GCTCGAGTCG TCGACTGGGA CCTTGCGCGA CCGATCGGAC TCGTGCTGCA AGAGGCACTC
GGAGGGGAAC AGCACCGATG A
|
|---|
| Protein sequence | MKRGRGHRDG SGREQHGDYG NHGAHEKHER RHRVDRGEWA LFASLALAGV GLLMGSQVLV
AAATVPLCYV AAAVFRTRQE PSVRIRREFQ TDGGVGRSGG SECADGDKNG DTTTVTTATT
TTTATTTASP TTTAATAATG STAATAATAA TDSTAATDST ATTDTTVTGN PGETVTVHTT
VENTGHTALV DLRLVDGVPD ALPVVSGTPR HATTLEPGGT TTLEYDVELR RGDHEFGTAA
LRARDLTGTV TETRTEPVGG ATRLRCWPSV EDVPLTSGSD EYAGEVPTDE SGSGLEFHSV
REYAAGDPAR SIDWRRYGRT RELATVEYRA ERSTRIVCVV DARTSQRRAS VATELAGVEL
SASAAERASE SLLDAGYPTG VATLYVRTVA ALSPGTDSST RKRLTEQLQR VRDRDANESA
DLQRLVGSPV KTLPRLLPDE AQVFLFSSFV DDEPLALVKR LRQLGYQVRV VSPDVLGDTA
GESASSEPRQ RDATQTRHDT GARLEALDRE ARLAQARAAG ARVVDWDLAR PIGLVLQEAL
GGEQHR
|
|---|
| |