| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_2778 |
|---|
| Symbol | |
|---|
| ID | 8825634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 2855641 |
|---|
| End bp | 2857056 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_003480895 |
|---|
| Protein GI | 289582429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC AGGAACAGTC GGCTGCCGGG TCGACGCCCG AGGCCGAAAC CCGATCACCC
GACGTGGTCG TCGTCGGCGC GGGGACGTCG GGTTGTTACG CGGCGGCGAC GATTGCGCAG
GCGGGCTATG AGGTTGTCGT CCTCGAGCGC AAAACCGAGG AGGAGGCGGG CCACATCGCC
TGCGGTGACG CCCTGAAGGG AGCCGACGCG TTCCCCGACG CGATTCCGAA GTCCAAACTC
GAACCCGCGT TTACCAACAC CGGCGTCGAT CACGGCCGCT TCGAGATTCC ACAGGAGGAT
ACCGTCCTCG AAATCCCGGT TCCCGGCGAA CTCGCCGTCA TCGACCGCTG GGAGTATGGC
CGACGCATTA TCGAGGGAGC GGCGGAGGCA GGCGCTGACT TCCACTACGA TACTGTCGTC
CAGAACGTCA CGCAGGAAGC CGACGACGGC CGCGTCACCG GTGTCGAGGC GATCCGGAAG
GGCCAACCGC TCACCTACGA GGCCGACATC GTCATCGACG CCGCGGGCGC GCTCTCGGTG
TTGCAGGACA ACGTCGACTT CTCGACCTCG ACGTTCGACA CCAACGTCAA CTACTCACAT
TTCTGTTCGG CCTACCGCGA GGTCGTCCAC GTCGAGGAGC CAGTAGAGTG GTCGGACGCG
CTCGTGTTCA AGCCGACCGA ACGCGCTGCG GGCTACCTCT GGTACTTCCC GCGCACGGAA
ACCGAAATCA ACGCCGGCCT CGGCTTCCAG ATGACCGAAG AGCCGATGAA ACTCGTCGAC
GACCTCAAAC ACGACCTCGA GAACCGTGCC GAGTTCGACG GTGCCGAGGT CGACGACAAA
CTCGGCGCTG CATTGCCGAC TCGCCGGCCG TACGACTCGG CCGTCCACCC CGGCTACATG
GCCGTTGGCG ACGCCGCAGG CCACGTTAAC CCCACCACCG GCGGCGGCAT CGCTGGTGCA
GCCTACGCCG GCAAATACGC TGCCGAACAG GCTATCGAGG GACTCGAGAC GGGCGACGTC
AGCGAGAAAG CCCTCTGGGA GTACAACGAA CGCGTGATGG ACCATTTCGG CGCTCGCTAC
GCTGCACTGG ACGTCTACAA CATTCTCTCG ACGGCCATCG ACGTCGACGA CCTGATGGGG
CTGCTCGCCG CGATGCCCGG CGAGAAACTC GCCGAGGCCC TTTACGAGGG CAGCACCAGC
GTCGGCCCGA AGCTCGCGTT CGAGAGCCTG CTCAACAGTC GCGGTCACTG GGGCACCATC
TGGACGCTGT TCCAGACTAA ACGCCGCGCC GACGACCTGC TCGAACTCTA CGACCACTAT
CCCGACCATC CCGCCGCACT CGAGCACTGG CAACAGCGAC GTGACGACGT GATGGAGGCG
GTCTACGAGG CGACCGGCGC TGATCCAAAG TACTGA
|
|---|
| Protein sequence | MSTQEQSAAG STPEAETRSP DVVVVGAGTS GCYAAATIAQ AGYEVVVLER KTEEEAGHIA
CGDALKGADA FPDAIPKSKL EPAFTNTGVD HGRFEIPQED TVLEIPVPGE LAVIDRWEYG
RRIIEGAAEA GADFHYDTVV QNVTQEADDG RVTGVEAIRK GQPLTYEADI VIDAAGALSV
LQDNVDFSTS TFDTNVNYSH FCSAYREVVH VEEPVEWSDA LVFKPTERAA GYLWYFPRTE
TEINAGLGFQ MTEEPMKLVD DLKHDLENRA EFDGAEVDDK LGAALPTRRP YDSAVHPGYM
AVGDAAGHVN PTTGGGIAGA AYAGKYAAEQ AIEGLETGDV SEKALWEYNE RVMDHFGARY
AALDVYNILS TAIDVDDLMG LLAAMPGEKL AEALYEGSTS VGPKLAFESL LNSRGHWGTI
WTLFQTKRRA DDLLELYDHY PDHPAALEHW QQRRDDVMEA VYEATGADPK Y
|
|---|
| |