| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmag_2406 |
|---|
| Symbol | |
|---|
| ID | 8825259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natrialba magadii ATCC 43099 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013922 |
|---|
| Strand | - |
|---|
| Start bp | 2456922 |
|---|
| End bp | 2458364 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | tRNA pseudouridine synthase D TruD |
|---|
| Protein accession | YP_003480529 |
|---|
| Protein GI | 289582063 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.967787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGG CACACCCCAC GGAGCAGGCC GTCGGAATGC AGGCCTACGT CAGCGACACC
AACGGCGTCG GCGGCCGCCT CCGCGCAGCC GACGACCACT TTCGCGTTCG CGAACGCGAG
CGCTTCGCGA CTGAACCGAT CGACGCCCCA ACCGACGCCT ACCCACATCT CGTCTTTCGC
GCAACCCTCC GCGGCTGGGA CACCAACGAC TTCGCAACCC GCCTCTCGGA CGCACTCGGC
ATCTCCCGCG AGCGCGTCAA CTGGGCCGGC ACCAAGGACA AGTACGCCGT CACGACCCAA
CTCTTCTCCG TCTACGATAC CACCAGCGAT GCCGGTGCCA CCGGCCTCCC CGACATCGAC
GGTGCCGACC TCGAGGTCCT CGGGCGCGCC GGTCGGTCAC TCGAGTTCGG TGACCTCGCA
GGGAACCAGT TCGAGATCGT GGTGAGCGAT GCCGACCAAC CAGAGACCGC GTCACAGATC
GCGGACGAAC TGTGCGAGTT CGGCGGTCTC GACGCTGTTG GGGCCGCTGG CGCGGACTCG
GAAACGGAAA CAACACCCGT CGGCGTCCCC AACTTCTTCG GCCAGCAGCG CTTTGGCAGC
CGCCGACCGG TCACCCACGA GGTCGGCCTC GAAATCGTCC GCGGTGACTG GGAGGGCGCG
GTGATGGCCT ATCTCGGCGC GCCGACCAAC GCCGAACCCG AGAGCACCCA GGAGGCTCGC
CGATTTATCG AGGAGACGCG AGACTGGCAG GAAGCCCTCG ATCGGTTCCC GAACCGACTG
CGCTACGAAC GCTCGATGCT TCACGAACTC GCAGAGTGCA CGGCCAACAG CGACGGAAAC
GGCGACCCCG ACCCCGCCGA TTTCCGCGCT GCACTCGAGC GTCTGCCCTC GAATCTCCAG
CGGCTGTTCG TCCACGCCGC GCAGTCGTAC GCGTTCAACC TGATGCTCTC GGAGCGTCTC
GAGCGCGGGC TACCGTTCGA TCGACCCGTT GCAGGTGACG TCGCGTGCTT TTCCGATACT
GGCGACGACG TGCCTGAAGA ACTCGTCCTC CCCGACACGG ACCGCCTCCA GCGCGTCGAC
GAGCGCCGTG TCCGGTCTGT AACTCGTCAC TGTGAGCGCG GCCGCGCGTT CGTCACTGCG
CCGCTCGTTG GCACCGAAAC AGAACTCGCC GACGGCGAAC AGGGCGAGAT CGAACGCGCC
GTACTGGACG ACCTCGATCT CGCCCCCGAG GACTTCGACC TGCCCGGTGA GTTCCACTCG
ACCGGCACGC GGCGGGCAGT CCTCGTGCAG ACTGAACTCG GAGTCGAGAC GGGTGGAGGA
GAGGAGTCTG AATCCGAGGC TGCAGCAGAC TCGCTCACCC TCTCGTTTGC GCTGCCGAAG
GGATCGTACG CGACCGTCGT CCTTCGGGAG TTCATGAAGG TCGACCCGAT CCACCTCGGG
TAG
|
|---|
| Protein sequence | MRPAHPTEQA VGMQAYVSDT NGVGGRLRAA DDHFRVRERE RFATEPIDAP TDAYPHLVFR
ATLRGWDTND FATRLSDALG ISRERVNWAG TKDKYAVTTQ LFSVYDTTSD AGATGLPDID
GADLEVLGRA GRSLEFGDLA GNQFEIVVSD ADQPETASQI ADELCEFGGL DAVGAAGADS
ETETTPVGVP NFFGQQRFGS RRPVTHEVGL EIVRGDWEGA VMAYLGAPTN AEPESTQEAR
RFIEETRDWQ EALDRFPNRL RYERSMLHEL AECTANSDGN GDPDPADFRA ALERLPSNLQ
RLFVHAAQSY AFNLMLSERL ERGLPFDRPV AGDVACFSDT GDDVPEELVL PDTDRLQRVD
ERRVRSVTRH CERGRAFVTA PLVGTETELA DGEQGEIERA VLDDLDLAPE DFDLPGEFHS
TGTRRAVLVQ TELGVETGGG EESESEAAAD SLTLSFALPK GSYATVVLRE FMKVDPIHLG
|
|---|
| |