Gene Nmag_2400 details

Gene Information

• Locus tag: Nmag_2400
• ID: 8825252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 2448290
• End bp: 2451874
• Gene Length: 3585 bp
• Protein Length: 1194 aa
• Translation table: 11
• GC content: 65%
• Product: UvrD/REP helicase
• Protein accession: YP_003480523
• Protein GI: 289582057

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAGC GTGAGACAAT GAGTGAGCGT GAGACAACGG CTGATACCGC GGACGCTGTC 
GCAGCGAGCG GTGAAACGGA CGCCGAACCC GACGCCGCGG CTCTCGAGCC AAAGGGCAAC 
CAGCCGGCCG TCATCGACGC GACCGGCGGC GCACACACCG TCGAAGCCGT CGCCGGCTCC 
GGCAAGACGA CGACGATGGT CAAGCGCCTG CAGGCCGAAA TCGAGGAGCG CGACGTTTCG 
CCTAACCGCC TGCTGGTGCT CACCTTCGCG AACGAGGCCG CCCACACGAT TCAGGAGAAA 
CTCCGCGAGG CGCTCGGCCC GCAGGTCGCC TTCGATATCG ACGTTTACAC CTACCACTCG 
TTTAGCTCGA AACTGCTGAC CGAGTACGCC TACCACGTCG GCGTCTCACC CGAGTTCGAC 
CTCGTCACCG AGGAAGACCG TCCGCAACTG ATCGAGTCCG TCTACGGCGA CGTCGACTTC 
TCGTTCGTCG CAGCCGGCTC GCCCTCCGCC GGCGGCACAA GCGACCAGAC GCTCTCCGCG 
CTCACTTCAT TCATCGAGGC GATGCGCCGC GAGGCCGTCA CCCCGGCCGA TATTCGGTCG 
TACCTCCCCA GTGACGAGGA CCTGCGTGAT CTGCTCGGGC TCGTCACCGA TCTCGAGGAG 
ATGGCTCACC AGGTCATCAA CGTCGACGCG AACGGCATTA TGTGGGACGC CGAAGCGCTC 
GCCGACCGCT GTGACCGCCT GCCGCGCGTC TACCGCGCAA AAGCCAGCCA GTTCGACGGC 
GACGGTCGGG TTCACTCCGC CGTCAGTGCC CACCTCGAGG CCATGGCCGA AACGGCCGAG 
AACATGGCCG ACCACCTCCG AACTGAATCC GAACTCGAGT GGCAGGCGTT TCGGCTCCCC 
GAGGCGATGT TCGAGGGCGA GCGGGGGCCA CTGACCTCGA TCACGCAGAC GCCGATGGGG 
CGGCTGTCGA ACTACGTTCA CATGCTCCGG CGGGCACGAG CGTTCGTCGG TGCATATGAA 
GCCTATCTCG AGGCGCTCGA CGAGCGCAAC GCCTTCGACT ACGACGAACT GATTCACCGG 
ACCGTCGACC TGCTTCGTGA CGAGCGCGTC CGTGACGACA TCCTCGCCGA GTGGGACGCC 
GTCTACTGCG ACGAGTTTCA GGACACGGAC GAGTCCCAAC TCGAGTTGGT CGAGGAACTG 
CGCGACGGCC TCGACATCAT GGTCGTCGGC GACAGCGATC AGGCCATCCA CGAGTGGCGC 
GGGCAGGATC CCGAGAATAT GTCGAAACTG CCCGAGTCGT TCGAGGAGAT CGGCCTGGAT 
CTGAACTTCC GGTCGCGCCA GCCGATTCTC GATCTGGCGA CGAATCTCGA TCCCGACAAG 
GACGAGATCG AGGCGTACAA GGAGCCGAAC CCGCCCAGCG TCGTCACAGT CGACAGCGAG 
GGCGAGCGTA CGCCGGCACA GGTGAGCACG ACGATTTCAC ATCTCCTCAC GGGTCGGTTC 
GAGGACGTTC CCGAGCGCGA ACTCGAGGAC ATCGCGGTGC TCGTCCGCCG AAACCAGAAC 
GCTCGCGATA TCGCGTCCCA GCTGGATCGG GACAGCATTC CCTACACCCT CTCGAGCGAT 
GCGTCGGGCG AACTCGGCCA CGGCGTGCGG ACGGTGCTGT CGTACTTCCG TGTCCTCGTC 
GAACCCGGCG ATGACGTGAG CTGGCAGCGC GTCCTTCTCC ACCTCTACCG CGTCCCCGAG 
GGAGACGTGG ATACGCTGTT GCGAGCCGGC GAGACCGTTC CGGCGGGGTA CGACGCGCTC 
GCAGAGCCGG CCGCCGAACT TCGCTGTCCC GACCGTGTCC ACGAGGCGCT CACGGACTAC 
AAGACGCTTC GATCGGTCTC GGACACCCAC GCAATCTCCG AGCTTTACCG CCACTTCAAG 
CGCGAGACGC GTATCGACTG GTTCCTCCGG GAACACGACC GAGACGCCCT CGCCAACGTC 
GAGCGCCTGA TCGAGGCGTT CAACGACAGT CCCGTCCAGT CCGAGCTGAC GCCGGCGTTC 
GTCGACTACC TGGAGCGCCA GGCCCACCTG CTCTCGGCCG ACGACGAGAC GGCGACTAGC 
CCTGGCTCGC AGTCTGCGGA TGCCGTCGAC GTCATGACCA TCCACCAGGC GAAGGGCCTT 
GACTTCGATA CCGTTCTACT TCCCTTCCTC ACCGAATCCG AGTTCGGCCA CATCACTCTC 
GCGAACTATC AGCGAGACCT CTACCGCTAC GATATACTGG TTGACGACGT GCAGGGCGAG 
CTGGCCGACC CGCTGCGGGC CGACTGCAGC GACGACCAGA TCGCAGAGGA GTGGCGCGTC 
CTCCACGTCG CACTCACCCG AGCGAAGGAG CACCTGTTCC TCTTCGGCAA CGACGTCGAG 
GAGCAGGGCC CCGGTGCGGA CATGCTGGAC GATCACCTGC CCAGTGAACG CAGCGAGACC 
CCGATCCACT GGTCTGCCGA GGGGCCACGC TTCTCCGTCT GGAACGCGCT CATGGACAGC 
TACGACGAGA TTGCGGCCGA CACACCCGAC GCCGTCCGGG ACTACACCGA CGCCGTCAAC 
CGCGGCGTCG ACGAGGACCC GGGGACGATC ACGTACTACC AAACCGAGGT CTCGACCGAC 
GAAGCGCTCG AGACAGTACT CGAGTTCGCC GACGAGGTCG TCGCCGGGAC GCTCGCTGAT 
GGCGACAGCG CCGCAAGTCC GAACACCGCC CGCTTCGCCG ACGCCCCCCT CGGCACCAGC 
GTCGACGTCG AACTCGCCCG CCAGCACAGC CACACCGCAC TCGAGTCCGT CCGCAACTGT 
GAGCGAAAGC ACGTCCTCGA TCACGTGGTG GACGCGTTCC CCGACCCAAC CCCAGCTACC 
GGCGGGGAAG CAGAGGTGAC CCAGGCCGAC GTTGGCTCGC TCTTCCACGA CGTCGCCGAA 
CTCGCCTACT GGCGCGGCTA CGACAGCAAA ACCGAGTGGC GCGAGGCCTG CGAGTGGGTC 
GCCCGTAGCC GCGACCTGAC GACCGCACTG GAGCCGGCAC TCGAGTGCAT CGATCGCTAC 
TTCGAGACCG ACGTGCCGGA GTGGCCGGCG GTCGGTGCAG AGGTGCCAAT CGCCGTCGAC 
GGCGACGAGA TTGCGGAGGT GAACGGCGAC ATCGCGGCTG TGGACGACGG CATCGCAGCT 
ATCGAAGGCG ACATAATCGG CTACGTCGAC AGCGTTCGCC GCCACCCTGA CGGCGGCCTC 
GTCGTACTCG ACTACAAGAC GAGCCAGGCC CAGAAGGACC TGGAGACGAG CCACCAACTC 
GAGCTCTACG TCCGCGCCTG TCGGGACCGC TTCGACGAGC CACTCAGCCA CGCCGGCTAC 
GTATACGTCG GTGACGCCGG GCCAGCAGTC CAGGTTTTCT CGGTCGACGA ACTGGCCACG 
CTGTGGGAGT CGGTACTCGA GGACCTGGCG ACGGCGGACG GCTCGTCGTT CGCGAACGCG 
ACGCCGGGAC CACACTGCCA GTTCTGTCCG CACCGGTCGC TTGGCTGTTC CGAGGGCGAA 
GACGAGTCAC CGTCTCTGGA TGCGTTCCAG ATCGATGGCC AGTGA 

 

Protein sequence

MTERETMSER ETTADTADAV AASGETDAEP DAAALEPKGN QPAVIDATGG AHTVEAVAGS 
GKTTTMVKRL QAEIEERDVS PNRLLVLTFA NEAAHTIQEK LREALGPQVA FDIDVYTYHS 
FSSKLLTEYA YHVGVSPEFD LVTEEDRPQL IESVYGDVDF SFVAAGSPSA GGTSDQTLSA 
LTSFIEAMRR EAVTPADIRS YLPSDEDLRD LLGLVTDLEE MAHQVINVDA NGIMWDAEAL 
ADRCDRLPRV YRAKASQFDG DGRVHSAVSA HLEAMAETAE NMADHLRTES ELEWQAFRLP 
EAMFEGERGP LTSITQTPMG RLSNYVHMLR RARAFVGAYE AYLEALDERN AFDYDELIHR 
TVDLLRDERV RDDILAEWDA VYCDEFQDTD ESQLELVEEL RDGLDIMVVG DSDQAIHEWR 
GQDPENMSKL PESFEEIGLD LNFRSRQPIL DLATNLDPDK DEIEAYKEPN PPSVVTVDSE 
GERTPAQVST TISHLLTGRF EDVPERELED IAVLVRRNQN ARDIASQLDR DSIPYTLSSD 
ASGELGHGVR TVLSYFRVLV EPGDDVSWQR VLLHLYRVPE GDVDTLLRAG ETVPAGYDAL 
AEPAAELRCP DRVHEALTDY KTLRSVSDTH AISELYRHFK RETRIDWFLR EHDRDALANV 
ERLIEAFNDS PVQSELTPAF VDYLERQAHL LSADDETATS PGSQSADAVD VMTIHQAKGL 
DFDTVLLPFL TESEFGHITL ANYQRDLYRY DILVDDVQGE LADPLRADCS DDQIAEEWRV 
LHVALTRAKE HLFLFGNDVE EQGPGADMLD DHLPSERSET PIHWSAEGPR FSVWNALMDS 
YDEIAADTPD AVRDYTDAVN RGVDEDPGTI TYYQTEVSTD EALETVLEFA DEVVAGTLAD 
GDSAASPNTA RFADAPLGTS VDVELARQHS HTALESVRNC ERKHVLDHVV DAFPDPTPAT 
GGEAEVTQAD VGSLFHDVAE LAYWRGYDSK TEWREACEWV ARSRDLTTAL EPALECIDRY 
FETDVPEWPA VGAEVPIAVD GDEIAEVNGD IAAVDDGIAA IEGDIIGYVD SVRRHPDGGL 
VVLDYKTSQA QKDLETSHQL ELYVRACRDR FDEPLSHAGY VYVGDAGPAV QVFSVDELAT 
LWESVLEDLA TADGSSFANA TPGPHCQFCP HRSLGCSEGE DESPSLDAFQ IDGQ