Gene Nmag_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_2098 
Symbol 
ID8824941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand+ 
Start bp2144003 
End bp2144689 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content55% 
IMG OID 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003480229 
Protein GI289581763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.546258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCTCG TTGCAGAGTT CAATATTCAC TGTGAGGCTC TCCCACTCGT CGAGGTAGCG 
GCTGCAGTGC CACGAGCAAC GCTCATTCTT GACATTCAGT TCAATCACGG TGACCGGCCA 
CTGTTTATTG CTACCGTAAC AGACGGTTCG CAGGCTGTCA TTGAGGAGGC TTTGACCGAC 
GCTTTCGACG TTGGTGAGTG GACACTGATT GGTCAGGCTG GCAAGACGCG ACGGTATCAG 
GTGTCACCAG CACTCGACTT CGAGGAACAA CTTGGTGAGC ACATCGAGGA CCTTTCTGGG 
CTCGAATCCC TCGCCACCAC CGAAGCTATC ATTGAACGTA TCGAGGTGAA AACGGACGGC 
TGGCGACAGT CAGGCTGGTT TGCCGACCGG GAGGCGTTCA ACGAGTTCTC GTCATTCTGG 
CAGCAAAACG CTGGGTTTCG GTTGCACCGA CTCACTCGTG ATGGCGAGTC TGAGCCACCC 
GGTGATGGCC TCTCGGACCG ACAACACGAG GCACTTAGAA CAGCCTACGA AATGGGTTAT 
TTTGACATTC CACGGAAGAC CTCTCTAGAC AGAATCGGGA AAGAATTAGA CATTTCGGCG 
TCTTCCGTAT CGGAGCGTCT CCGTCGCGCT CAAACCCAGT TCCTACAGGA TACGATGGCC 
CCAACGTGGC CACCACTCCC CGAGTAA
 
Protein sequence
MGLVAEFNIH CEALPLVEVA AAVPRATLIL DIQFNHGDRP LFIATVTDGS QAVIEEALTD 
AFDVGEWTLI GQAGKTRRYQ VSPALDFEEQ LGEHIEDLSG LESLATTEAI IERIEVKTDG 
WRQSGWFADR EAFNEFSSFW QQNAGFRLHR LTRDGESEPP GDGLSDRQHE ALRTAYEMGY 
FDIPRKTSLD RIGKELDISA SSVSERLRRA QTQFLQDTMA PTWPPLPE