Gene Nmag_2085 details

Gene Information

• Locus tag: Nmag_2085
• ID: 8824928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: -
• Start bp: 2128720
• End bp: 2130819
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 66%
• Product: DNA ligase, NAD-dependent
• Protein accession: YP_003480216
• Protein GI: 289581750

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCTCG CCGACGAAAA CACGGACGAG AACCCGTATC TCCGGGACCC ACCGACAGCG 
TTCGAGCCGC CAGAACAACT CTCGGACGAC GAGGCCGAGC AACAGGTCGA ACAGCTTCGG 
GACGCCATCC GCGAACACGA CCGCCGGTAC TACGTCGAAA ACGACCCGCT CATCGCCGAC 
CGGACCTACG ACACGCTGTT CGAGCGACTG CAGGTACTCG AGTCCACCTT CGATCTCAGT 
CACCCCGACA GTCCGACGAG AAGCGTCGGC GGCGAGCCGA TCGAGGCCTT CGAGACGGTC 
GAACACGAGG CACCGATGCT CTCGATCGAC CAGAGCGGCG AGGAGGCCGA TGTTCGTGAG 
TTCGACGAGC GCGTCCGGCG CGAGGTCGGA GCGGTCGACT ACGTCTGTGA GCCCAAGTTC 
GACGGGGTCT CGATGGAGTT CGTCTACGAG GACGGCAGCC TCCAGCGCGC CGTCACCCGC 
GGCGACGGCC GTGAGGGTGA CGATGTGACG CGAAACGCCC GGACCATCGG CTCGGTTCCA 
CAGAAGCTCC ACGGCGACTA CCCCGACTTC CTCGCGGTCC GCGGCGAGGT TTTCATGCCG 
AAAGACGCCT TTCAGGAACA CAATCGCGAG CGGATCGAAC GCGGCGAGGA GCCCTTCGCC 
AACCCGCGCA ATGCGACCGC CGGCACCATC CGCCAGCTTG ACCCCGAAAT TGTCGCCGAG 
CGGCCGCTCG ACGTCTTCTA CTTCGACGTG CTCGCAGCGA GTGAACTCGA GGACAGCCAT 
CGCGAGGAAC TCGAGCGCTT TCCCGAGTTC GGCCTGCGAG TGACGGACCA TGTCGAGATT 
GTCGACGACA TCGACGACGC CATTGCGTAC CGCGACCGGA TGCTCGAGGC TCGCGACGAC 
CTGAACTACG AAATCGACGG CACCGTGATC AAGGTCGACG ACCGCGACGC TCGCGAGGAA 
CTCGGCCGAA CGGCCAGACA CGACCGTTAC GCCTTCGCCT ACAAGTTCCC CGCCCGCGCG 
GAGGTGACGC CAATCGCCGA CGTGGCCGTC CAGATCGGCC GCACCGGTCG AGTAACCCCC 
GTCGCACTGC TCGAACCGGT CGACGTCGGC GGCGTCACCG TCTCGCGTGC GAGCCTGCAC 
AACCCCGAGG AAATCGCCGA GAAAACCGTC GCTATCGGCG ACACTGTCCG CGTCCAGCGC 
GCCGGCGACG TAATCCCCTA TGTCGAGGAA GTCATCGAGA AAGGGGCGGA CAACGACCCC 
GAGAGCCACT ACGAACTCCC CGACCACTGC CCCGTCTGTG ACAGCGCCAT CGAACGCGAC 
GGGCCGATGG CGTTCTGTAC CGGCGGCCTG GCGTGTGACG CCCAGCTCCG GCGCTCTATC 
GAGTACTACG CAAGCGACGG CGGTCTCGAC CTGGAGGGCC TCGGCGAGAA GAGCGTCCGC 
CAACTCGTCG ACGCCGGACT CGTCGAATCC ATCGCTGACC TCTACGAACT CGAGTGCGAG 
GAACTGACCG CACTCGAGGG CTGGGGTGAC ACGAGCGCAG AGAACCTCCT GTCGGAGATC 
GAGGCCAGCC GCGAGCCACC GCTGGCGGAC TTCCTCTCAG CGCTTGGTAT CCCCCACGTG 
GGACCGACGA CGGCACGCGA ACTCGCCCGT GAGTTCGGGA CATTCGAGGC AGTCCGCGAG 
GCCGCCGAGG ACGACCCGGC GGCACTCGAG GGCGTCGACG ACGTGGGCGA GACAGTCGCG 
GAGACGATTC ACGAGTTCTT CGCAAGCGAG GCGAACGCTG CAGCAGTGGC CGACATTCTC 
GCTCACGTCT CGCCACAGGA GTCCGACCTG GAGTCCGGCG GCGACGAACT CGACGGCCTG 
ACGTTCGTCT TTACGGGGTC GCTCGCCGAC GTGACCCGCA GCGAGGCCCA GGAGACGGTC 
GAGGCCCATG GGGCGAACGC GACGGGAAGC GTGTCGGGGA ATACGGACTA CCTCGTTGTC 
GGCGAGAATC CGGGTGCGAC GAAGCGCGAG GACGCCGAGG AAAACGACGT GCCGATCATC 
GACGAGAGTG AGTTCCGCGA GCTGCTGGCA GAGCGTGGGA TCGGCCTCGC GTCACAGTAG 

 

Protein sequence

MSLADENTDE NPYLRDPPTA FEPPEQLSDD EAEQQVEQLR DAIREHDRRY YVENDPLIAD 
RTYDTLFERL QVLESTFDLS HPDSPTRSVG GEPIEAFETV EHEAPMLSID QSGEEADVRE 
FDERVRREVG AVDYVCEPKF DGVSMEFVYE DGSLQRAVTR GDGREGDDVT RNARTIGSVP 
QKLHGDYPDF LAVRGEVFMP KDAFQEHNRE RIERGEEPFA NPRNATAGTI RQLDPEIVAE 
RPLDVFYFDV LAASELEDSH REELERFPEF GLRVTDHVEI VDDIDDAIAY RDRMLEARDD 
LNYEIDGTVI KVDDRDAREE LGRTARHDRY AFAYKFPARA EVTPIADVAV QIGRTGRVTP 
VALLEPVDVG GVTVSRASLH NPEEIAEKTV AIGDTVRVQR AGDVIPYVEE VIEKGADNDP 
ESHYELPDHC PVCDSAIERD GPMAFCTGGL ACDAQLRRSI EYYASDGGLD LEGLGEKSVR 
QLVDAGLVES IADLYELECE ELTALEGWGD TSAENLLSEI EASREPPLAD FLSALGIPHV 
GPTTARELAR EFGTFEAVRE AAEDDPAALE GVDDVGETVA ETIHEFFASE ANAAAVADIL 
AHVSPQESDL ESGGDELDGL TFVFTGSLAD VTRSEAQETV EAHGANATGS VSGNTDYLVV 
GENPGATKRE DAEENDVPII DESEFRELLA ERGIGLASQ