Gene Nmag_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmag_1980 
Symbol 
ID8824822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatrialba magadii ATCC 43099 
KingdomArchaea 
Replicon accessionNC_013922 
Strand
Start bp2013116 
End bp2015605 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content64% 
IMG OID 
Producthelicase domain protein 
Protein accessionYP_003480113 
Protein GI289581647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCC AGGACGAGGA GCCGCCCTCA ATCGATCACC CGCTACTCGA GTCCAACTTT 
CTCGAGCGCC GCCTCTACCA GCTGAAACTC GCCGGGACCG CCGCGAACGG TCACACGCTC
GTCTGTCTCC CGACGGGCCT CGGCAAGACG ACCGTAAGCC TGCTCGTGAC GGCGCGACGA
CTCGACGAGG TCGGCGGCAC GTCGCTGATG CTCGCGCCGA CAAAGCCCCT CGTCCAGCAA
CACGCCGACT TCTACCGCGA AGCGCTCCAG ATACCCGATG AGGAAATCGT CGTCTTCACC
GGCGACGTGA GCCCGGACAA CCGCGCCGAA CTGTGGGAGG AGGCGACGAT CGTGATGGCC
ACTCCGCAGG TGATCGAGAA CGACCTCGTC GGGAGCCGAA TCTCGCTCGC CGACGTGACC
CACCTGACGT TCGACGAGTG CCACCGCGCG ACCGGCGACT ACGCCTACAA CTACATCGCC
GAGCGCTACC ACGCGGACGC GACGGACCCG CTCGTGACGG GGATGTCGGC CTCGCCCGGC
GGCGACGAGG AGGCGATCCT CGAGGTCTGT GAGAACCTCG GCCTACAGGA AGTCGAGGTG
ATGACCGAGG AGGACGCAGA CGTCGACGAG TTCACCCACG ACACGGAGGT CGAATGGGAG
CGGATCGACC TCCCCGACGA CGTGCTGGAG ATCCGCGACG CGCTGAACGA GGTGATCACA
GACCGACTCG AGAAACTCAA AGAACTGGGC GTCGCGAAGT CGACCCAGCC CGACCAATCC
CAGAAGGACC TGAACCGGAT GCGCGCCGAG TTACAGCAGT TAATCAACAA CGACCAGTCG
GAGGGGTTCA AGGGAATGTC GGTTCACGCG GAGGTGATGA AGCTCCGCCA GGCGGTCACG
CTCGTCGAAA CACAGAGCGT CGAGGCTCTG CGGCGGTACT TCGACCGCCA GCGCAACCAG
GCCCGCTCCT CAGGCGCGTC GAAGGCCAGC CAGCGGATGG TCTCGGACCC GCGCGTTCGT
GAGGCCATGC GAAAGGCCGA AAGCTTCGAC GAGTTACATC CCAAGTACCG CAAGACGCGG
ATGCTCCTCG CGGAAACGCT CGGACTCGAG GGCGGCGAGC GCGTGATCGT CTTCACCGAG
TCCCGAGACA CGGCGGAGGC GCTGACGGCG TTCCTCTCGG ATAGCTTCGA CGCGAAGCGC
TTCGTCGGGC AAGGCGACCG CGAGGGGTCA GACGGTATGA CGCAGAAACA GCAACAGGAA
GTGCTCGACG AGTTCCGCGC CGCCGAGTTC GAGGTGCTCG TCTCCACGTC GGTTGCCGAA
GAGGGGCTCG ACGTGCCCGA AGTCGACCTC GTGCTCTTCT ACGAACCGGT CCCCACGGCG
ATTCGGTCCA TTCAGCGCAA GGGCCGGACC GGCCGCCAGT CCGAGGGCCG TGTCGTCGTC
CTCATGGCCG AAGACACCCG CGACGAGGCC TACTTCTGGA TCTCCCGCCG CCGCGAGAAG
GAGATGGAAT CCGAACTGCG CGAACTGAAA GGGATGGCCG ACGACCTCGC CGAGGAACTC
GACGAGTCCC AGCAGTCGCT CGCCGATTTC GGCGGGGACT CGAGTAGCGC CAGTGGTGCT
GCTGACAACG AAAACGAAAG CGAAGTGAAA GTAGACGAAA ACACCACCAA TCCCGACGCA
GTCTCCGACT CTTCCAGTGG AAGCGGAGGG GGTTCGGATC AGCCAGGGCT GCGGGAGTTC
GATGCGGCCA GCGACGACGA TGAAACGGCG GACGGCGACT CGGACAGCGA GACCGACAAC
GTGGAGACGC ACGAGCCGTC GGCCGAGGGC GACGCGATCG AAATCGTCGC CGACCAGCGC
GAGATGGACG CCAACATCGC CCGCGACCTC TCCCGACGTG AGGAGATCGA GGTTCGACTC
GAGACGCTCG ACGTGGGCGA CTACGTCCTC TCGGATCGCG TCGTCGTCGA ACGCAAGTCC
GTCGCCGACT TCGTCGACTC GCTGGTCGGC GGTGACCGCT CCGTCTTCGA GCAGGTCGGT
GCGATGGCTC GCCACTACGC CCGGCCCATC GTCGTCGTCG AGGGCGACGG CCTGTACGAA
CAGCGGGACA TCCACCCGAA CGCGATTCGT GGGTCGCTTT CGAGTCTGGC TGTCGACTTC
GGCGCGAGCG TGCTCCGAAC CGAGGGAGAA GCGGAGACGA TGGAATTGTT CGCGGTGATC
GCAGGTCGGG AACAGAAACT CTCAGACCGT GAGGTCTCGG TCCACGGCGA GAAGCAGTCG
AAGACACTGG CCGAACAACA GGAGTACGTC GTCTCCTCGA TCGCAGAAAT TGGACCGGTG
ACGGCGCGCT CGCTACTCGA GGAGTTCGGC ACGGTTGAAG CGGTGATGAT CGCGACCGAA
GACGAGTTGC AGGCGGCCGA CGGCGTCGGA CAGGTGACTG CTGAACGGAT GCGCGAAGTG
ATTGGGAGCG ACTACAGCAA CTACTCTTAA
 
Protein sequence
MAAQDEEPPS IDHPLLESNF LERRLYQLKL AGTAANGHTL VCLPTGLGKT TVSLLVTARR 
LDEVGGTSLM LAPTKPLVQQ HADFYREALQ IPDEEIVVFT GDVSPDNRAE LWEEATIVMA
TPQVIENDLV GSRISLADVT HLTFDECHRA TGDYAYNYIA ERYHADATDP LVTGMSASPG
GDEEAILEVC ENLGLQEVEV MTEEDADVDE FTHDTEVEWE RIDLPDDVLE IRDALNEVIT
DRLEKLKELG VAKSTQPDQS QKDLNRMRAE LQQLINNDQS EGFKGMSVHA EVMKLRQAVT
LVETQSVEAL RRYFDRQRNQ ARSSGASKAS QRMVSDPRVR EAMRKAESFD ELHPKYRKTR
MLLAETLGLE GGERVIVFTE SRDTAEALTA FLSDSFDAKR FVGQGDREGS DGMTQKQQQE
VLDEFRAAEF EVLVSTSVAE EGLDVPEVDL VLFYEPVPTA IRSIQRKGRT GRQSEGRVVV
LMAEDTRDEA YFWISRRREK EMESELRELK GMADDLAEEL DESQQSLADF GGDSSSASGA
ADNENESEVK VDENTTNPDA VSDSSSGSGG GSDQPGLREF DAASDDDETA DGDSDSETDN
VETHEPSAEG DAIEIVADQR EMDANIARDL SRREEIEVRL ETLDVGDYVL SDRVVVERKS
VADFVDSLVG GDRSVFEQVG AMARHYARPI VVVEGDGLYE QRDIHPNAIR GSLSSLAVDF
GASVLRTEGE AETMELFAVI AGREQKLSDR EVSVHGEKQS KTLAEQQEYV VSSIAEIGPV
TARSLLEEFG TVEAVMIATE DELQAADGVG QVTAERMREV IGSDYSNYS