Gene Nmag_1977 details

Gene Information

• Locus tag: Nmag_1977
• ID: 8824819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 2007848
• End bp: 2008618
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 66%
• Product: Sjogrens syndrome scleroderma autoantigen 1
• Protein accession: YP_003480110
• Protein GI: 289581644

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACT TCGATAAGGA GGCCGAGCGC GAGAAGCTTC GGGAGAAGTA CGAGCGCGAC 
AAGGAAGAGC GACAGGCGAC CCAGCGCATG AGCGACCTGC TGCTCAAGGG GGCGACGATG 
ACGAACTCCC ACTGTGGCAC CTGTGGGGAC CCGCTGTTTC AGGAGAGCGG GACGACGTTC 
TGTCCAAGCT GTCACGGGAG TCCGGACGCT GTGCAGGGGA CCGGGCTGGA GGCGGACGCG 
GCTGACGCGG ATGCAGCCGA CGATGCTGCG CCCGAAGAGA CTGCGCCCGA GGCCGGGACT 
GGGGCCGAGA CCGCCACAGA CGAGCGAAAC GCCGCCGCGG ACTCGTCCGA GATGGCCGAC 
CGCGCCGACA CCGACGCGCC AAGAGATCCC AAAGTCACGT CTCAGCCGTC GGATGAGACT 
GATTCGGACC GTACGGATGC AGACCGGTCA CGGCCAACGT CGGGGTCGTA CTCTCAGTCT 
CAGCCGCAGA CTCAGTCTCA GTCTCAGCCT CAGAGTCGGA CCCAGACCCA GAACCAGACC 
AAGGCCCACC CACAGTCACC ACCTCGCCGC GACGAGCCAA CACCTGCCAG CAGCGTCGAC 
ACGAACGCCA CTGATAGCAG CGCCGGCGAC CGCTCCGCTG CTCGCGACTC GCTGACGCGT 
GCACTCGAGA AGTTCGCCGC CGAGGCAGCG GCTACCGACG ACCCGCGGTA CGCGAAAGAG 
TGTCTCGAGG CAGCCCGTGA AGCGAGCGAG GCGCTAGAGT CGCTTCGCTG A 

 

Protein sequence

MSDFDKEAER EKLREKYERD KEERQATQRM SDLLLKGATM TNSHCGTCGD PLFQESGTTF 
CPSCHGSPDA VQGTGLEADA ADADAADDAA PEETAPEAGT GAETATDERN AAADSSEMAD 
RADTDAPRDP KVTSQPSDET DSDRTDADRS RPTSGSYSQS QPQTQSQSQP QSRTQTQNQT 
KAHPQSPPRR DEPTPASSVD TNATDSSAGD RSAARDSLTR ALEKFAAEAA ATDDPRYAKE 
CLEAAREASE ALESLR