Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmag_1524 |
Symbol | |
ID | 8824358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natrialba magadii ATCC 43099 |
Kingdom | Archaea |
Replicon accession | NC_013922 |
Strand | - |
Start bp | 1553583 |
End bp | 1555454 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | ABC-2 type transporter |
Protein accession | YP_003479662 |
Protein GI | 289581196 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGTAAAA CTCCATACAT AGAGGTGAAA AGCAGTCGTT ACTGGGTGTA TTGTCTCTTC CTCTTCGTGC TCGGAATAAC TGCAACTGCT GGTGGCCCAA TCAGTCCACA TCGATTGTAC CCCCCGGGCG AGTTTGAGCG TGGCGAGTTT GTCGTGCTCG CGACGTTCCA GTGGTTTGTC GCGGTTATTG GCGCTTTTGC TGCTGTGCTC GCCGGGTATG CGACGGTGGT CGGCGACCGG ACTAGTGGAC GGATTCGGTT GTTACTGAAG TTGCCGTACA CTCGCCGGGA GTATCTCGTT AGGAGATTTC TCGGCGAAGC TTTCGCACTC GTGTTGTTCA CTACCCTTGC CATTGTCGCT GGCGTAACCA TCTCGACGGC TCTCTATGGT CAGCCGCCCC TGTTTCCGGT CGCGGTATTT CTCGTGCTCT CGGCCGGGTA CCTTCTCGTC TGGTTTTCTT TTGCGACCGC CGTTTCCATG GTCGTCCGGA CCGGACGTCA AGCGATCACC GTCGTCGTTC CAGCCGTATT AGTAGCGATT TCCTGGTCAA GTTTGGTGAA CGGGCTCTTC CGACTAGTTC CTGTTACGGA ATCACCGTTG CTCTACTTCT TTGCCCATCG ATTGTCTCCT CACGACGCAT ACTACACCGT GACGAACTGG GCAATGGGGC TGCCAAACGC GCATAACACT GCCGGATCCG TAATACGCTA CTTTGAGTCG GACGCTATCG TTCTCCTCAG TTCGATGCAT ATCGTTCCAG AGGTAATCGA AGGGTCGATT CCGTGGTACC TCTCAGAGTG GGTCTCGCTG CTGGTGTTGG TCCTGTGGGG CGTCCTACCC GTGGGGATCG CCTACTGGCG GTTCTCAAGG TCAGACCTTG ATCCCGGCCC GTCCACAGGC GTTCGTCGAC TCCTCGGTCG GACCGATCGA TCCAACCACG GACGAACCCT GACACGACGC TTGCTTGCGG GCAGCAGTCT TTCCGGTCGT GCAACGCCCC TTCTTTTGTT TGTGATCCGC CAAGGGCTAG TGAAAATTCG CAGGCCGGCC TACTGGGCGT ACGGTCTGGT GGTCGTGTTA TTCAGCCTCG AGCTCCTCAT CGGGCCTGTG TCCGGCATTC CAGCGAATCC GCCGCCGGAA TACGCACTGA TGATTCTCCA ATCGGTGGTA GCGTACCTCG GCGGAATTGC TGCCGTCTTC GCCGGCTACG CCCTGGTCAC CGGCGACCGA GCGAGCGGCC GGACTCGACT ATTGCTTAAA TATCCCAGGG ATCGATGGGA GTACGTTCTC AGCAAGCTCT TTGGTGAGGC GGTCACGCTC GTGGTGGTTA CCACGCTGGC TTTACTCCCG GTCATCCTCG TCTCAACAGC GCTGTACGGC CCACCACCGG TGATTCGGAC GATCGCGGTT CTGGTGGCCT CTGGAGTGTA TCTCCTCATG TGGGTATCTA TCGCTACCGC TATCTCTGCC ATCGCCAAGA CCGGCCGTCG GGCGATCACG CTGGCGTTAT CGGTGTTTAT GGTCCTGCCG TTTTTCTGGG ACGATCTCTA CGCGGCACTG GTGTCGACGA TCACCGAGAA CCCGAGTCCA GGACCGTATT TCTTTACGGA ACGGCTTATT CCGCAGTATT CGTACCAGGC GGCGACAAAC TGGATTGCAG GACTGCCCAA TTCCAACGAC GCCGGCAGCA GCGTGCTTGA GAAACTAACC ACTGACGACC CCATGCCAAC CGTGACACTC CTTTCAGATG TGTTCGACGG CGGCGTCCCG TGGTACCTCT CGGAGTGGCT TTCGGTACCT ATACTGGTCC TATGGGGGAC CGTGCCGATC GTGATCGCCT GTTGGCGGTT CGAACGAATC GATCTCACAT GA
|
Protein sequence | MCKTPYIEVK SSRYWVYCLF LFVLGITATA GGPISPHRLY PPGEFERGEF VVLATFQWFV AVIGAFAAVL AGYATVVGDR TSGRIRLLLK LPYTRREYLV RRFLGEAFAL VLFTTLAIVA GVTISTALYG QPPLFPVAVF LVLSAGYLLV WFSFATAVSM VVRTGRQAIT VVVPAVLVAI SWSSLVNGLF RLVPVTESPL LYFFAHRLSP HDAYYTVTNW AMGLPNAHNT AGSVIRYFES DAIVLLSSMH IVPEVIEGSI PWYLSEWVSL LVLVLWGVLP VGIAYWRFSR SDLDPGPSTG VRRLLGRTDR SNHGRTLTRR LLAGSSLSGR ATPLLLFVIR QGLVKIRRPA YWAYGLVVVL FSLELLIGPV SGIPANPPPE YALMILQSVV AYLGGIAAVF AGYALVTGDR ASGRTRLLLK YPRDRWEYVL SKLFGEAVTL VVVTTLALLP VILVSTALYG PPPVIRTIAV LVASGVYLLM WVSIATAISA IAKTGRRAIT LALSVFMVLP FFWDDLYAAL VSTITENPSP GPYFFTERLI PQYSYQAATN WIAGLPNSND AGSSVLEKLT TDDPMPTVTL LSDVFDGGVP WYLSEWLSVP ILVLWGTVPI VIACWRFERI DLT
|
| |