Gene Nmag_1215 details

Gene Information

• Locus tag: Nmag_1215
• ID: 8824047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 1238064
• End bp: 1238711
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 62%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003479359
• Protein GI: 289580893

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGACGA TAGCCGAGCT TCGGCTTCCG GCCACCGAAA ACACCCTCGT GACTGCGTTC 
GAACACACCC CCGAGATTAC CTTCGAACTC GAGTCGTCGG TCTCGAAAAC CAGACCCTGT 
CTCTGGGTCA CGGACGTCTC TCGCGAGGCG GCCGAGGAGA CGTTCGATAC CGACCCGGTT 
GTGCTCGAGC ACGACCTGCT CGTCGAGTCA GATTCGAGAC TGCTGTTCGA CGTCGAGTTC 
GTCGACGGTG CGGGCACTGA CGAGCTCTGT GAGACGCTGC TGGTCGACGG CGGCTCGCTG 
CTCGAGATGT GGGGCACCGA CGGCTGGTGG CAAGCCAGAG TCAGATACCG TGACCGCGAA 
ACGTTAACCG ACGCCTACGA CCGCCTGACG GAGTCGGGTA CCAACGTCGA CCTGCGACGG 
ATCACCGATA TCGCCCAGTC GAACGGTGGC GAGACCCGGC TCACCCCCGA ACAGCAAGAG 
GCGCTCGAGG CCGCACTCGA GTACGGTTAC TTCGAGATTC CGCGAAGCAT CTCGATGGAG 
GAGCTGGCGG CCGAGCTGGG AATCTCGCAT CAGGCGCTCT CCGAGCGATT CCGCCGGGCG 
TACGAGACGC TGGTAAACGA GGAGCTACAG CACGTAGAGC AGTCCTAA 

 

Protein sequence

MSTIAELRLP ATENTLVTAF EHTPEITFEL ESSVSKTRPC LWVTDVSREA AEETFDTDPV 
VLEHDLLVES DSRLLFDVEF VDGAGTDELC ETLLVDGGSL LEMWGTDGWW QARVRYRDRE 
TLTDAYDRLT ESGTNVDLRR ITDIAQSNGG ETRLTPEQQE ALEAALEYGY FEIPRSISME 
ELAAELGISH QALSERFRRA YETLVNEELQ HVEQS