Gene Nmag_1039 details

Gene Information

• Locus tag: Nmag_1039
• ID: 8823870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: -
• Start bp: 1061259
• End bp: 1062023
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 60%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003479185
• Protein GI: 289580719

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.169994
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACGG ATCGTCTTCG CGAGTTCACG TTCACGCTGA CGTACGACGA AGGCGAAGAC 
CCGGTGGCAG ACATGTATCA CAGCCACCCG AATCTCGAAG CACTAACGAT CGACGTCACG 
ACCGGTCGGA CGTCGTTCGT GCGACTCGTC CAGCTCAGGG GCCCACCGGA AGTGGCCGAC 
CGCCTCCAGA CGGTCCTCGA GGACCGTGAT TATCTCCCGC GAGCAATCGG AACGGATCGA 
TGTTGTGGGA CGAGTACCTC CTATCGCCTC GAGTGTGCAC CGAGACAGCG GCTAATATAC 
GTCTACGTCG AAGACATCTG CGACTGTCAG TCAGTCTACA ATATCGCCTC GGAACACCTC 
CAGCGGGGAA CGATTATCGA GCGAAGACAG CACGATGGTC GGGAACGGTG GCGGCTCCTG 
ATGCGGTCCG ACGAAGCGGT CGGTGAGCTG TTCGAACACA TCGAAACGGC CTGCAGGAAC 
GGTGTCACCG TCGAGGCTGG ACAGCTCGGA GAAGCGACCG AGTGGCACGG AGACGCGTTC 
GTCGATGACG AGTTGACCGG GTCACAACGA GAGGCAGTCG CACAGGCGGC TGCACGTGGG 
TACTACGAAC GGCCCCGTGA AGTCACGGTT GGGGAGCTTT CGGCCGAACT CGATATCCCG 
AAGTCGACGC TCTCCTATCG ACTTCGGATG GCCGAGTCGA AACTTGTCAA GCGGTATCTG 
GGCCGGTATA CCGATGCCGA GACTGACGAC GCTCTGGGAA GTTGA 

 

Protein sequence

MKTDRLREFT FTLTYDEGED PVADMYHSHP NLEALTIDVT TGRTSFVRLV QLRGPPEVAD 
RLQTVLEDRD YLPRAIGTDR CCGTSTSYRL ECAPRQRLIY VYVEDICDCQ SVYNIASEHL 
QRGTIIERRQ HDGRERWRLL MRSDEAVGEL FEHIETACRN GVTVEAGQLG EATEWHGDAF 
VDDELTGSQR EAVAQAAARG YYERPREVTV GELSAELDIP KSTLSYRLRM AESKLVKRYL 
GRYTDAETDD ALGS