Gene Nmag_1012 details

Gene Information

• Locus tag: Nmag_1012
• ID: 8823843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 1031453
• End bp: 1034917
• Gene Length: 3465 bp
• Protein Length: 1154 aa
• Translation table: 11
• GC content: 65%
• Product: putative PAS/PAC sensor protein
• Protein accession: YP_003479158
• Protein GI: 289580692

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0819572
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACCG CACGGACTGT CGACGCTCCC CCGCCGCAAC TGCTCGTCGT CGGGGCTACA 
CTTGCGGACG AGTTCGCTTC TCTCTCCGCC GAGAACGGCG GACGGCTCGC CGGTGCCGAC 
ATCGAGTCGG TCCCGTCGTC GTCGGCTGCA CTCGAGTGGC TCGACCAGCA GCCGAACGCC 
GACAGGGTCG ACTGCGTGGT GACAGCGGCC GATCTTCCCG ACGGGTCGGG ACTGGCGCTA 
CTCGAGGCGA TTCGGGGGCG CAGCACAGGA GCCGGAGAGG GAGTGGGAAG GGGAGACTCG 
ATAAGTAGCA GGCGAGACGC AACGAGTGGA GACCACAGCG AGATCCCCAT CGTCCTCTCG 
CCGGCGGCAG GTGACGGGAG TGATGCGCTG GCGCGAGCAG CCGCCGCTGC CGGTAGTACC 
GAGTACGTCC CACGTGTCGG TGAGACGAGA GCGGGCGAAG ATACGGAGAC AGATTCAGCT 
CCTGCTGTGG ATACCAGCTC GGTCCAGAAT GACCCACTCC TGGCAGCCGT CGAGCGGGTA 
CTGTCGCGGG TTGAGCGACG AGACCGACAC CGAGAGCAGG CTCGCCAGTT CGAGGCAATC 
TTCGACGATC CCTCGGCGTA CGCCTGGGTG CTCGATTCCG ACGGAATCGT CCGACGGGCG 
AACGAGGGTG CGCTCGCCGA CCTCGACGCG ACGCCGTCCG ACGTTCGCGG GCGCGAACTC 
TGGTCGCTCG CCTCGTGGGG CCGATTCGAT ACCTGTCGCG ACACGATCGA ACAGGCCGTC 
GAGACGGCTG CGAGCGGCCG GGTGGTACGT CGGGAGATAA CGCGCGAGCG GCCGAATAAC 
GAGGTCGAGA GAACCGGAGG TGATGACGAG GCGACAGGAA ACGACCGCCA GACGCTCGAT 
CTGACCGTCC GACCAGTCAC CGACGGCGAC CGCGTCACGA CGATCCTCGT CCGCGCAACG 
GATGTCACCG AGCGCGCGGC ACTCGAGTCC GATCTGCGCG AGTCCGAGGA ACTTCATCGG 
GTGACGCTCA ATCACATGAC CGATACGGTC CTCATCACGA ACGACGAGGG TGAGTTTACC 
TACGTCTGCC CGAACGTGCA CTTCATTTTC AGCTACACGG ACGAGGAGAT CCACGAGATG 
GGGTCGATCG ACGAACTCCT CGGTGCGGAC CTGTTCGACC GTGCGGAACT CGCCGAGGAC 
GGCGTGCTCA CGGATATTGA GTGTACGGCG ACGGACAAGG CGGGTCGCGA GCATACCCTG 
CTGGTCAACG TCCGCGAGGT CTCGATTCAG GACGGAACGC ATCTCTACAG CTGTCGCGAT 
ATTACGACCC GCAAGCGCCG TGAGGAGGCG TTGACGGCGC TTCACCGCAC CGCTCGCGAG 
TTGCTGTACG CCGAGACGGA TCGCGAAATC GCGGCCATCA CTGTCGACGA CGCGACGGAC 
GTGCTCGACC TCGAGGCGAG TGCGATCTAC CTGTTCGACA CCGACGAGAA CGTGCTTCGT 
CCGGCCGCTC GTTCGGAGTC GATGGCGGCG CTTCACGGTC CGCTCTCAGC CCAGCAGGTT 
GGTCAGGGTA TCGTCGGCGA CGTCTTCGTC GACGGCGAGA GCCGCCTCCT GGCGGACGTT 
CACGACTCGC CGCTACTCGC CGAGCCGACG ACGGAGATCA GAAGCGCCGC GTTCGTCCCG 
CTCGGCGATC ACGGCGTCTT CGTCGCCGGC TCGCCCGAGG TGGGTGTCTT CGACGAGGTC 
TCTGGCGAGG TGACTGACCT GCTTGCAACG ACAGCGGAGG CGGCGCTCGA CCGCGTCGAA 
CGCGAGCGCA CGCTTCGGGA GCGCGACCGC GAACTCAAGC GTCAGAACCG CCAGCTGACC 
AGTCTCAACC AGATCAACGA GATCATCCGC GAGATCGACC AGGAACTCGT CCAGGCCGAA 
ACGCGCGACG AGATCGAACA CGGCGTCTGC GACCGGTTGA CGGCCACCGA CCGCTTCTCG 
TTCGCCTGGA TCGGTACTGA CGATCCATCC GGGGAGCGAC TCGAGTCTCG TACCCACGGC 
GGGACGGATC GCGGTCGGGA CTACCTCGAC AGCGTCTCGC TCTCGCTTCC CGAACAGCCC 
GCAGAGTCCG CAGCGTCCGT ACAGCCCGCA GAGTCCGCAG AGCCCGCAGA CGCTGCACAG 
CCAGCTGACG GAGCCACAGG AGACGAATCG ACAGCGACAA CAGAAACCGC AACTGCAACC 
GCACCATCCG TCCACGGCCG CGAACCCGCC GTCAGAACTG CCGTCACACG CGAGGGAACG 
GTCGTCGCAA ACGTCGTCGA CGACCTGCGC GAGCAGCCCT GGCGGAGCGA GGCCCTCGCT 
CGCGAGTATC AGTCGGTCAT CAGCGTCCCA CTCTCTTACG ACGAGTTCTC ATACGGTGTC 
CTGACCGTCT ACGCGGACCG ACCCGACGCC TTCGACGAGG TCACCCGCGC TGTCCTCACC 
GAACTCGGCG AAACGATCGC CTCGGCCATC GCTGCGGTCG ACCGCAAGCG CGCACTTCTC 
TCGAACGCGA ACACGCGACT CGAGTTCGAC GTCGCAGACG AGAACTTCGT TTTCACCCGT 
CTCGCGACAC GCGTAGACTG TACGATCTCG TTCGACGGCG GCGTTCGCCA GCACGAGGAC 
GGGGCGACGG TGTTCGCCTC GGTCGAGGGC GCGCCGGCAG CCGATGTGGC CGCTGCCGCG 
ACAGAACTCG TCGCGGTCAC CGATGCACAG GTCGTCAGTG ACCATCGACG AGGGGGGTAC 
GGGAGTGTAA ACGCGAACGC GAGCGCAACT GTGAGCGCGG ACGCGAACTC GAACTCGAAC 
CCGAACCCGG ACGCGAACTC GAACTCGAAC TCGAACCCGA ACCCGGACGC GAACTCGAAC 
TCGAACTCGA ACCCGAACCC GGTCTCGAAC TCGAACACGA GTACCGACCT ATCCGAGTCC 
GACAGGGCCA ACGCCGACGA AACCGACAGC AACGCGAACG GTGAGCGCGG TGGGACGATC 
AGGCTCGAAC TCGCTCGGCC GTTTCCGGCA CTCACGCTCG CAGATCATGG CGCGATTCTC 
CGGAGTGTCC GGGCGACACC GGAGTCGACT CGCGTCGTCG TCGACGTTCC GGCGGATGTC 
GAGACAGGTA GTGGCGCTGC TGGCGGTGTC GGCACCGGTG CGAGCACCGA TATCGTGACA 
ACCGCCTTTT CCGATATCGA ACTCCGTTCG AAACGTCGCG TTGACCGGAC GACGCCGCGT 
GATATTCGGG CAGAACTACT CGAGCGCCTA ACCGACAGGC AACTCGAGGT GGTCCAGCAC 
GCATACTACA GCGGTTACTT CGAGTCGCCG CGCGAGCGCT CCGGTGAGGA GATTTCGTCG 
ACACTTTCGA TTTCGCCGGC CGCGTTCTAT CGGCACCATC GGACGGTCCA GCGAAAGCTC 
TTCACTGTGT TGTTCGACGA TCTTGGTATT TCGACACACA CGTAG 

 

Protein sequence

MDTARTVDAP PPQLLVVGAT LADEFASLSA ENGGRLAGAD IESVPSSSAA LEWLDQQPNA 
DRVDCVVTAA DLPDGSGLAL LEAIRGRSTG AGEGVGRGDS ISSRRDATSG DHSEIPIVLS 
PAAGDGSDAL ARAAAAAGST EYVPRVGETR AGEDTETDSA PAVDTSSVQN DPLLAAVERV 
LSRVERRDRH REQARQFEAI FDDPSAYAWV LDSDGIVRRA NEGALADLDA TPSDVRGREL 
WSLASWGRFD TCRDTIEQAV ETAASGRVVR REITRERPNN EVERTGGDDE ATGNDRQTLD 
LTVRPVTDGD RVTTILVRAT DVTERAALES DLRESEELHR VTLNHMTDTV LITNDEGEFT 
YVCPNVHFIF SYTDEEIHEM GSIDELLGAD LFDRAELAED GVLTDIECTA TDKAGREHTL 
LVNVREVSIQ DGTHLYSCRD ITTRKRREEA LTALHRTARE LLYAETDREI AAITVDDATD 
VLDLEASAIY LFDTDENVLR PAARSESMAA LHGPLSAQQV GQGIVGDVFV DGESRLLADV 
HDSPLLAEPT TEIRSAAFVP LGDHGVFVAG SPEVGVFDEV SGEVTDLLAT TAEAALDRVE 
RERTLRERDR ELKRQNRQLT SLNQINEIIR EIDQELVQAE TRDEIEHGVC DRLTATDRFS 
FAWIGTDDPS GERLESRTHG GTDRGRDYLD SVSLSLPEQP AESAASVQPA ESAEPADAAQ 
PADGATGDES TATTETATAT APSVHGREPA VRTAVTREGT VVANVVDDLR EQPWRSEALA 
REYQSVISVP LSYDEFSYGV LTVYADRPDA FDEVTRAVLT ELGETIASAI AAVDRKRALL 
SNANTRLEFD VADENFVFTR LATRVDCTIS FDGGVRQHED GATVFASVEG APAADVAAAA 
TELVAVTDAQ VVSDHRRGGY GSVNANASAT VSADANSNSN PNPDANSNSN SNPNPDANSN 
SNSNPNPVSN SNTSTDLSES DRANADETDS NANGERGGTI RLELARPFPA LTLADHGAIL 
RSVRATPEST RVVVDVPADV ETGSGAAGGV GTGASTDIVT TAFSDIELRS KRRVDRTTPR 
DIRAELLERL TDRQLEVVQH AYYSGYFESP RERSGEEISS TLSISPAAFY RHHRTVQRKL 
FTVLFDDLGI STHT