Gene Nmag_0860 details

Gene Information

• Locus tag: Nmag_0860
• ID: 8823689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 873271
• End bp: 876666
• Gene Length: 3396 bp
• Protein Length: 1131 aa
• Translation table: 11
• GC content: 64%
• Product: Patched family protein
• Protein accession: YP_003479006
• Protein GI: 289580540

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAC CAAAACGGGT CGCAGACCTT CTGACCTCCC ACTCGCGACT CGTTCTCGTC 
GTCCTCCTCG TGCTGACCGC CCTCGTCGGC GCGGGCGTCC CAATGGTCGA CGACGATTCC 
TCGCTCGATC AGTTCGAAAC CGACTCGCCC GAAGCCGAAG CACTCGAGGA CATCGACGAG 
CGATTCGTCG CGGAGGATCA GGAGGACACG ACGACAGTGC AGTTGATCCA CCGCGGTGAT 
GGCGGTGGCG ACGGCGTAGA CACCAACGCA ACCGCTGAAA ACGTCCTCTC ACAGGACTCA 
CTCATCGAGT CACTCGAGTT CCAGCAGGAG ATTCGTAACA ACGAATCAAT CAACGAGACG 
CTCGCCTACG ACAGCGAAGG TGATGTCATC ACTGGCGTCG AGAACGTCGT CGCGATCACG 
GCAATCACCA CGGAGCAGGC CGCTGATCTC GAAGAGCGCG GCGCAGAACT CGAACAGCGC 
GAAGGTGAAC TCGAGGAGAC GAGCGCACAA CTCGAGGCCG GCATCGACGA CGCGCGCGAG 
ATCCAGCGCG AACAGGAGCA ACTGAGCGCA ACGTACGACG AAGACGACCC CGAATACCAG 
GAAGGTGTCG CCGAACTCGA AAACGAGTAC GATGCCCTGC TGGACGAGGT GACGGCCGGC 
CTCGACGACG AGCAGGCCGA GGAGTACGAG GAGTTCGCCG ATCAGGCGCG CTTCCTCGAA 
TCACAGCTGT TCCAGATCGA ACAGCAAGCC GAGAATCCCG AGGAAGTCCC CGAGTACCAG 
GAGACCTCTG AGAACCTCGA AGACGTCTAC ACCGGTGCGA CGATGGGCGT CCTCGAAGAC 
GAGTACGAGC AACTCGAGGC GGACGGTAAC CAGCTAGAGG AAGACCAGGC CGAACTCGAG 
GAGAGTGAGC CTGATCCAAC GCTCGACGAA CAGCTCGAGG CACTCGAGGA ACTCGACGAG 
GACGAGTTCG AAGACATCCT GACGGATACC CTCTCTGATG ACGACGAGAA CGACGGTGCC 
GCACTCGCGT TCATGCCGTC GGACTACGAG CCCGGCACCG CCGAGGCGGA CGCGCGGATG 
ACGGTGCTCA CGCAGGAGGC AGCGGGTGAG ATGGAGATGG GCGCTGGCGA CGACGCGGTG 
ATCGACGCAC AGCTCGATCT GCGCGACCTC GCAGGCGAGC ACGAACACGA GTACGTCGTC 
TTCGGTGTCG GTGTCATCAC GGACGAGATC GACCGTTCGA TGGGCGACAG CCTCTCGATC 
GTCGGGCCGC TCGCGCTGAC GTTCGTCGTC GCCGCGCTGA TAATCGCCTA CCGCGACCCG 
CTCGACATCG TCCTCGGCGT GGTCGGTATC GGCACAGTCT TGCTCTGGAC GTTCGGCTTC 
ATGGGTTGGG CCGGAATCGC GTTCAACCAG ATGATGATCG CCGTCCCGGT CCTGTTGATC 
GGGCTCTCGA TCGACTATGC GATCCACGTC TTCATGCGCC ACCGCGAGCA ACGCGAGGCG 
GTTCGGTCAG ACGACACCGA TCGAGAGACG GGCGACGCCG ACACCGTTCG CGGTTCGATG 
TCCATCGCAC TCGCCGGCGT CGGCGTCGCG CTCGTCTGGG TGACCGCGAC GACCGCTATC 
GGCTTCCTCG CGAACCTCGT CAGTCCGATC GCCCCCATTC AGGAGTTCGG GGTCGTCAGC 
TCTGTTGGGA TCGTCGCCGC GCTAATCGTC TTCGGCGGGC TGATCCCGGC CGCCAAAGTC 
GAACTCGACT CGGTACTCGA GTCCCGTGGC TACGACCGCC ACCGGCGCGC GTTCGGGACG 
GGTGGCGGGC GCTTCAGTAG CGTGCTTACG CTCGGTTCGA CCGCTGCGCG GCGCATTCCG 
CTCGTGATCC TGATCGCAGT TCTGCTGTTG ACCGCAGGCG GCGTCTACGG CGCGAGCCAG 
GTCGACACGA GCTTCGACGA GGAGGAGTTC CTCGCAGAGA GTCCGCCGGC GTGGACCGAG 
AACCTGCCTG GCGGGATGAG CCCCGGTGAG TACCAGGCGG CCGACGACCT CGATTTCGTC 
AACGAGAACT TCCAGCGCGA GGACACGCAG GCCCAGATAC TCGTGGAAGG TAATGTGACC 
GACGCGGAGA CCGTAGAGCG CCTCGACGCC GCCGGGGAGG CAGCAGCAGA GAGTCCGGTC 
ACGTATACGC TGGCGACCGG CGAAGCGGAC GTCGAGGGGC CGCTCTCGGT GATGGAAGAC 
ACCGCAGCAC AGAACGAGTC GTTCAACGAG ACCTACACTG CGGCGGATAC GACCGGTGAC 
GACATCCCCG ACGAAAACAT CGCAGAACTG TATGACGAAC TCTTCGAGGC GAACGACGCA 
GGCGCGAGTG AGGTCATCCA CCAGACTGAC GACGGCGGGT ACGAGTCCGT CCGGCTGATC 
GTCGCCATCC AGGGCGACGC CGACTTCGGT GACGCGACCG AGGAAATGCG CGCTATCGCA 
GCGGGCATCG ACAGCGAGGG TGCCGGTGAC GAGCGAACGG TCGGAACGGC GGTCGATGGC 
CCCACCGACA CCGACACCGA CACCGACACC GACACCGACG ACGAACTCGC CGTCAGCGCC 
ATCGCGACCG GCGATCCGAT CGTCAACTAT CTCGTCGAAC AGGATCTGCT CGATACCGTC 
TTACAGAGCC TGCTGATTAC GCTGGTTGCC GTCTTCACGT TCCTCACGGT GGCCTACTGG 
CTAACCGGGA ATAGCGCCAG TCTCGGTGCC GTCACTCTGC TGCCGGTCGC GTTCGCCGTC 
AGCTGGATTC TCGGCACGAT GTATCTCATC GGGATGCCCT TCAACGTCCT GACGGGGATG 
ATCACCAGCC TCACCATCGG GCTCGGTGTG GCCTACAGCA TCCACATTAG CTCGCGCTAC 
ACGCTCGAAC TCGAGCGCCA GGGCAACGTC TGGGCGGCGA TGCACACGAC CGTCACCGGC 
ACCGGTGGCG CGCTGCTCGG CAGCGCGGTC ACCACTGTCG GCGGCTTCGG GACGCTCGTG 
TTCGCCATCC TGCCCGTACT CCGCCAGTTC GGGATCATCA CCGGGCTGAC GATCACGTAC 
GCGTTCCTCG CGAGCGTCGT CGTGTTGCCG ACGCTCCTCG CGCTGTGGAC GCGGTACTTC 
GGCCCGGACG TGTCGTTCGA CATCGATCAG GCCCGACAGC CGACGCCGAC GGCGAGCGAT 
GGTGGACGTG CGCTGGATGG AGATGGGGAT GCGAGCTCGG CTGCAGCCGT CGATGCAACT 
GCAGAGACTG AAACCGAAAC AGACACTGAC GAGACGACAA CCGAAACCGA AACAGACACC 
GACGAGACGA CAACCGAAAC CGAAACAGAC ACCGACGAGA CGACAACCGA AACCGAAACA 
GACGACCGAA CGCCACCCGC AGGTGACGAC CAATGA 

 

Protein sequence

MSAPKRVADL LTSHSRLVLV VLLVLTALVG AGVPMVDDDS SLDQFETDSP EAEALEDIDE 
RFVAEDQEDT TTVQLIHRGD GGGDGVDTNA TAENVLSQDS LIESLEFQQE IRNNESINET 
LAYDSEGDVI TGVENVVAIT AITTEQAADL EERGAELEQR EGELEETSAQ LEAGIDDARE 
IQREQEQLSA TYDEDDPEYQ EGVAELENEY DALLDEVTAG LDDEQAEEYE EFADQARFLE 
SQLFQIEQQA ENPEEVPEYQ ETSENLEDVY TGATMGVLED EYEQLEADGN QLEEDQAELE 
ESEPDPTLDE QLEALEELDE DEFEDILTDT LSDDDENDGA ALAFMPSDYE PGTAEADARM 
TVLTQEAAGE MEMGAGDDAV IDAQLDLRDL AGEHEHEYVV FGVGVITDEI DRSMGDSLSI 
VGPLALTFVV AALIIAYRDP LDIVLGVVGI GTVLLWTFGF MGWAGIAFNQ MMIAVPVLLI 
GLSIDYAIHV FMRHREQREA VRSDDTDRET GDADTVRGSM SIALAGVGVA LVWVTATTAI 
GFLANLVSPI APIQEFGVVS SVGIVAALIV FGGLIPAAKV ELDSVLESRG YDRHRRAFGT 
GGGRFSSVLT LGSTAARRIP LVILIAVLLL TAGGVYGASQ VDTSFDEEEF LAESPPAWTE 
NLPGGMSPGE YQAADDLDFV NENFQREDTQ AQILVEGNVT DAETVERLDA AGEAAAESPV 
TYTLATGEAD VEGPLSVMED TAAQNESFNE TYTAADTTGD DIPDENIAEL YDELFEANDA 
GASEVIHQTD DGGYESVRLI VAIQGDADFG DATEEMRAIA AGIDSEGAGD ERTVGTAVDG 
PTDTDTDTDT DTDDELAVSA IATGDPIVNY LVEQDLLDTV LQSLLITLVA VFTFLTVAYW 
LTGNSASLGA VTLLPVAFAV SWILGTMYLI GMPFNVLTGM ITSLTIGLGV AYSIHISSRY 
TLELERQGNV WAAMHTTVTG TGGALLGSAV TTVGGFGTLV FAILPVLRQF GIITGLTITY 
AFLASVVVLP TLLALWTRYF GPDVSFDIDQ ARQPTPTASD GGRALDGDGD ASSAAAVDAT 
AETETETDTD ETTTETETDT DETTTETETD TDETTTETET DDRTPPAGDD Q