Gene Nmag_0543 details

Gene Information

• Locus tag: Nmag_0543
• ID: 8823370
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Natrialba magadii ATCC 43099
• Kingdom: Archaea
• Replicon accession: NC_013922
• Strand: +
• Start bp: 536720
• End bp: 537439
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 65%
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003478692
• Protein GI: 289580226

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATTCG TCGAGGTGAC CGTCGAGGGA GATGACTGGG GCGAGGAGAG TGCTGCTGAA 
GGCGACAACG AAAGCGGGGA CAGTGAGGAG GACGAAACGA CTCCCGCAGA CACCCGCTCG 
TTCGACGCGC GGATCGCCGC CGAAGACGCC ATCGTCCGGG AGGAACTGCT CAACTGGCGA 
ATGAGTCGGA ACGACGTGCT CAACCAGCTC CTGTTCGTCG TCGGCGACCG GACAGTGTAC 
GAGGCGGCAC TCGAGTCGGC TCCCGAAATC GTCGGCTACG AACTCAAAGC GGTCGACGAC 
GAGCGGTTCT ACGCGTACGT ACAGGAGGAC TCGCCCGACG CCGACCAGTC GTGGTGGGCC 
GCCTTCTTCG GCCACGACTT CATCCACGTG CCGCCCGTCG TCATTGAGGA CGGCGTCGTT 
CGGCTGACGC TGCTCGGCGA GTTCGAGGCG CTGCGCGAGG TCGTCGACGA CCTCTCGGCA 
ACAGTCTCCG TCGAAATCGA GGAGATCGGT GACTACCGCG GTCGCGGGCC ACGGGTTACG 
GATCAACTGA CCGCCAGACA GTACCGGGCG CTTCGCCAGG CCGTCGACTG TGGCTACTAC 
GAGATTCCGC GCGAGGGGAG TCTCGCCGAT ATCGCGGCGG CACTCGAGTG TACCGAGAGT 
ACGGCCTCGG ACCTGCTTCG ACGGGCGGAG CGAGCGGTGA TGCAGTCAGT GCTATCGTAG 

 

Protein sequence

MRFVEVTVEG DDWGEESAAE GDNESGDSEE DETTPADTRS FDARIAAEDA IVREELLNWR 
MSRNDVLNQL LFVVGDRTVY EAALESAPEI VGYELKAVDD ERFYAYVQED SPDADQSWWA 
AFFGHDFIHV PPVVIEDGVV RLTLLGEFEA LREVVDDLSA TVSVEIEEIG DYRGRGPRVT 
DQLTARQYRA LRQAVDCGYY EIPREGSLAD IAAALECTES TASDLLRRAE RAVMQSVLS